KEGG   Gallus gallus (chicken): 423853
Entry
423853            CDS       T01006                                 
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
gga  Gallus gallus (chicken)
Pathway
gga03410  Base excision repair
gga03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    423853 (POLL)
   03450 Non-homologous end-joining
    423853 (POLL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gga03400]
    423853 (POLL)
Enzymes [BR:gga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     423853 (POLL)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     423853 (POLL)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     423853 (POLL)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 BRCT BRCT_2 HHH_5 PTCB-BRCT LIG3_BRCT NTP_transf_2 HHH IMS_HHH zf-LYAR
Other DBs
NCBI-GeneID: 423853
NCBI-ProteinID: XP_004942267
CGNC: 5862
Ensembl: ENSGALG00000007753
Position
6:23755163..23775909
AA seq 643 aa
MLLKSMSASGCSLQQQLQLNVSPGERGTAGPMEPRGIVKAFPKRKKVRDDSGKSVPPKIP
KEGMEEPEAEWLKPVAAYVLQAGIGQARAEIFHKQIVQNGGCVHNRLCSEVTHVIVAEDM
DCDRAFRLLKLAKLPSRLQLVKASWLSDCIRDQKLLNTTGYSVFIPRRGLIHGRYREEGE
QQQQLLGSEEIRSSTEESTAEPNAKAQLGDSSQQNLDSLAQHQPSESSGRISCDLHRGVE
GTGTECERGAYTDTSSTKVYDDEDSEGEDASVTQGDLEALISGHYPVKLSEETSDSSSAV
AQPASKWVCAQSSNSKKENHNQCITEKLEVLAKAYSVQGDKWRALGYAKAINALKSYHKP
VTSYQEACKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQMW
YQQGFRTLDDIRTKASLTSQQAVGLKHYEDFLERMPREEAAEIEQTVRQAALALKPGLVC
VACGSYRRGKATCGDVDVLVTHPDGQSHRGLFSKLLDSLHESGFLTDDLVSQEDNGDQKK
YLGVCRLPGPARRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL
SMAVVRGPGGVKVASGHALPTPTERDVFIQLGLPYREPSERDW
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgctgctcaaaagcatgtctgcctctggatgctccttgcagcagcagctgcagcttaac
gtctccccaggggagcgaggcacagccgggcctatggaaccacgagggattgtcaaagcc
tttcccaagaggaagaaggtgagggatgactcgggaaaaagtgtccctccaaagatccca
aaagaaggaatggaggagcccgaggcagagtggctgaaaccagtcgctgcctacgtgttg
caagctggcatcggccaagctagggcagagatcttccacaagcagattgtccagaatggg
ggatgtgtacacaaccgtctctgctcggaggtgacgcacgtcattgtagctgaagatatg
gactgtgatcgggccttccggctcctgaaattagccaagctgccttcgaggttgcagctg
gtgaaggcatcctggctcagtgattgcattagagatcagaagctgctgaataccactggc
tacagtgtctttatccctcggaggggtctgatccatggcaggtaccgggaagagggagaa
cagcagcagcagctcctgggcagcgaagaaatccggtcctcaacagaggagagtacagca
gaaccaaatgctaaagcacagctgggggattcctcacagcaaaacctggacagccttgca
cagcaccaaccatctgagagttcagggcgtatctcctgtgatctgcatcgtggggtggaa
ggcacagggactgaatgtgagagaggtgcctatacagacaccagttcaacaaaagtctat
gatgatgaagacagtgaaggagaagatgctagtgtcactcagggagatctggaagcgctg
atttctggccactatcctgtgaaattgtcagaggagaccagcgacagctcttccgcagtg
gcccagcctgccagcaagtgggtttgtgcacagtcctccaacagcaagaaggagaatcac
aaccagtgcatcacagagaagctggaagtgctggcgaaagcctattctgtccagggggac
aagtggagagctctgggctacgctaaagccatcaatgcactcaaaagctaccacaaaccg
gtcacctcctaccaggaagcctgtaaaattcctgggattgggaagcgaatggcagagaag
atcctggagatcttggagagtggacatctacgcaagctggatcatatcagtgagagtgtg
cctgtgctggagctattttccaacatctggggagcaggggtcaagacagctcagatgtgg
taccagcaggggttccggacactggatgatatccgcacaaaggcgtctctcaccagccag
caagccgtgggcctgaagcactatgaggatttcctggagcgcatgcctcgggaggaagct
gcagaaatagagcagaccgtcagacaagcagccctggccctgaagcctgggcttgtgtgt
gtggcatgtggctcctaccgtcggggaaaggccacctgcggagatgtggacgtgctggtc
actcacccggatggtcagtctcaccgtgggctgttcagcaagctgcttgacagcctccac
gagagcggcttccttactgatgacctggtgagtcaggaggacaacggtgatcagaagaag
tatctgggggtgtgccgccttcctgggccggcccgtcgtcaccgacgtctggacatcatc
gtggtaccttacagtgagtttgcctgcgccctgctctacttcaccggctcggctcacttc
aaccgctccatgcgcgccctggccaagaccaagggcatgagcctctcagagcatgccctc
agcatggctgtggtgcgaggccctggtggtgtcaaggtggcatctggccatgctctgccc
accccgaccgagagagatgtcttcattcagctggggctgccttaccgagagccctcggaa
cgggactggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (22)   
   RefSeq(pep) (22)   
DNA sequence (33)   
   RefSeq(nuc) (23)   
   GenBank (5)   
   EMBL (5)   
Protein domain (13)   
   Pfam (13)   
All databases (98)   

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