KEGG   Gallus gallus (chicken): 424926
Entry
424926            CDS       T01006                                 
Symbol
PSMD1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
  KO
K03032  26S proteasome regulatory subunit N2
Organism
gga  Gallus gallus (chicken)
Pathway
gga03050  Proteasome
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    424926 (PSMD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:gga03051]
    424926 (PSMD1)
Proteasome [BR:gga03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     424926 (PSMD1)
SSDB
Motif
Pfam: RPN2_N RPN2_C PC_rep HEAT_2 HEAT HEAT_EZ Tim54
Other DBs
NCBI-GeneID: 424926
NCBI-ProteinID: NP_001012618
CGNC: 5786
Ensembl: ENSGALG00000007664
UniProt: Q5F418
Position
9:15291664..15353111
AA seq 955 aa
MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAELPE
GEKKPVDERLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDIFEKTILESNDVPGMLAYS
LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGSEKDSDAMEAE
EKPGSTCVGKSAEINPEPKDQISKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG
LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR
RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC
AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVSQFRQLYSKVINDK
HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS
LAFTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPPPLEVPKEKEKEKVSTAVLSITAKAK
KKEKEKEKEKKEEEKMEVDETEKKDEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMTESC
RYQPFKPLSIGGIIILKDTSEDMEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgatcacctcggccgctggaattatctctcttctggatgaggaagagccacagctcaag
gagtttgctcttcacaagctgaatgctgttgtcaacgatttctgggcagaaatctccgag
tcagtggacaaaatcgaagttctctatgaagatgagggcttccggagccggcagtttgct
gctttggttgcttccaaagtgttttaccacctgggagcttttgaggagtcgctgaactat
gccctgggagcaggtgacctcttcaacgtcaatgacaactcggaatacgtggaaacgatc
attgcaaaatgtatcgaccactataccaagcagtgtgtggaaaatgcagaactgccagaa
ggggagaagaaacctgttgatgaaaggctagaaggcatagtgaacaaaatgttccagcgg
tgcttggatgaccacaagtacaagcaggcaattggcattgctctagagacacgcaggctg
gacatctttgagaagaccatcctcgaatcgaacgatgttcctgggatgctggcctacagc
ttgaagctctgtatgtctctgatgcagaacaaacagtttcgtaataaagtcttgagagtc
ctagttaaaatctacatgaatctggagaagccagacttcatcaacgtgtgccagtgcctg
atattcttggatgacccacaggctgtaagcgacatcttggaaaaactagtgaaggaagat
aaccttctcatggcttatcaaatttgctttgacctgtatgaaagtgctagccagcagttc
ttgtcttctgtgatccaaaatcttcgcactgttggaactcctattgcctctgtgcctgga
tccaccaacaccggcactgtccctgggtcagagaaagacagtgatgcaatggaagcagaa
gagaagccaggaagcacctgcgtggggaagtctgcagaaattaaccctgagcccaaggac
cagatctcaaaaatgattaaaattttaagtggggaaatggctattgagttacatctgcaa
tttttaatacgaaacaacaacacagacctcatgatcctcaaaaacacaaaggatgcagtg
cggaattctgtgtgtcacacagcaacggttatagcaaactcctttatgcactgtggtaca
accagtgaccaattcctgagagacaatttggagtggctggccagggcgactaattgggct
aagtttactgctactgccagcttgggtgttatacacaagggacatgagaaagaagcactc
cagctaatggcaacatacctacccaaggacacctctccaggctcagcctaccaggagggt
ggaggcctctatgccttgggtctcattcatgctaaccatggtggtgacatcatcgactat
ttgctgaaccagctgaagaatgccagtaatgatattgtccgacacggtggcagcttgggt
ttgggtctggctgccatggggacagcacgtcaagatgtgtacgatttactgaaaacaaat
ctgtatcaggatgatgcagtgacaggtgaggcagctggcctggcgctgggactggttatg
ttgggctctaaaaacgctcaggccattgaggacatggttggctacgcacaggaaacccaa
catgagaagattttgcgaggtcttgctgttggaattgctctggtcatgtatgggaggatg
gaagaggcagatgctctcattgagagtctttgcagagataaggatccaattctccgtcgt
tctggcatgtacacagttgctatggcatactgtggctcagggaacaacaaggctatcaga
cgcctgctgcatgtggctgtcagtgatgtgaatgatgatgtgaggcgtgcagctgttgaa
tcgcttggtttcattctgttcaggactcctgagcagtgtccaagtgtggtttctttgctg
tcagagagctacaacccccatgtgcgctatggggctgccatggctttgggcatctgctgt
gcgggcactggaaacaaggaagcaattaatttgcttgaaccaatgacaaatgatcctgtg
aactatgtacgtcaaggagctctgattgcatctgcccttatcatgatccagcagactgag
attacctgcccaaaggtcagccagttcagacaactctattccaaagtgatcaatgataaa
cacgatgatgttatggccaagtttggagcgatcctggcacaaggcattttggatgcaggg
ggacataatgtgactatttcgctgcagtcaaggacaggacacactcacatgccttctgtg
gtgggagttctggtcttcacccagttctggttctggttccccctgagtcacttcttgtca
ctggctttcaccccaacatgtgtcattggccttaacaaggatcttaagatgccaaaagtc
caatacaaatccaactgtaagccgtccacgtttgcctaccccccacctctggaggtacca
aaggaaaaggagaaagaaaaggtttccactgctgtgctgtccatcactgcaaaagccaag
aagaaggaaaaggagaaggagaaagagaagaaggaagaagaaaagatggaagtggatgag
actgaaaagaaggatgaaaaagaaaagaagaaagagcctgagcccaatttccagcttttg
gacaacccagcaagagtcatgcctgctcagctcaaagttcttactatgacagagagctgc
cggtatcagcctttcaaaccactctccattggaggcatcatcattctgaaggacaccagt
gaggatatggaggagctggttgaacctgtggcagctcatggtccgaagatcgaagaagag
gagcaggaacctgaaccaccagagccctttgagtacattgatgattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (7)   
   Pfam (7)   
All databases (92)   

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