KEGG   Gallus gallus (chicken): 427379
Entry
427379            CDS       T01006                                 
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
gga  Gallus gallus (chicken)
Pathway
gga03013  Nucleocytoplasmic transport
gga03015  mRNA surveillance pathway
gga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    427379 (NCBP1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    427379 (NCBP1)
   03015 mRNA surveillance pathway
    427379 (NCBP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    427379 (NCBP1)
   03041 Spliceosome [BR:gga03041]
    427379 (NCBP1)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     427379 (NCBP1)
Spliceosome [BR:gga03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    427379 (NCBP1)
SSDB
Motif
Pfam: MIF4G_like_2 MIF4G MIF4G_like Mis12
Other DBs
NCBI-GeneID: 427379
NCBI-ProteinID: NP_001026611
CGNC: 53067
Ensembl: ENSGALG00000002087
UniProt: Q5ZJZ6
Position
Z:complement(70943785..70975777)
AA seq 793 aa
MSRRRHSDDSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLE
ADLPNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKV
NMYNEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYIFAFLSSLP
WVGKELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQK
LKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDP
EGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAE
LFQLPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFS
HHLSNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSP
ANPVCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDDEGFT
FNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHP
QMIAVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKE
LEDTKARLARQHKRRDSDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRF
IMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTFENLLFTAELDHH
ILAVFQQFCALQA
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgtcgcggcggaggcacagcgacgatagcgacgacagcgatgggcagcctcacaagcgg
cggaggacgtcggagccgtcggagatcgaggagaggctcgagtcgctcatctgcagagta
ggagagaagagtaattcatctctggagagcaacttggagggcctagctggtgtactggaa
gctgatctaccaaattacaaaagcaagatactaagaatcctttgtactgttgcacgtctg
ttaccagaaaagcttactgtttacacaacactagttgggttgctgaatgccaggaactac
aactttggtggggaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaagtc
aatatgtacaatgaagctgtgcatttagttcgttttctttctgatcttgtgaattgtcat
gtcatagctgcaccttcgatggtagctatgtttgagaactttgtgagtgtgacacaggag
gaagacgtaccacaagtacgatgtgactggtatatatttgcatttctgtcatctttacct
tgggttggaaaggaactgtatgagaaaaaggatgctgagatggatcgtctcttatctcag
acagaaagctacctgaaacgccgccagaagattcatgtaccaatgttacaagtttggact
gctgataagccacatccacaggaagaatatttagactgcctctggtctcagatccagaag
ttgaaaaaagaccgttggcaagaacgacacattctaaggccctacctggcttttgatagc
attctttgtgaagcactgcaacacaatctgccaccattcactcctccacctcacactgaa
gactcagtatatcctatgccaagggttatttttaggatgtttgactacactgacgaccct
gagggccctgtcatgcctggcagccattctgttgaacgatttgtaatagaagagaacctt
cactgcatcatcaaatcccactggaaagagagaaagacttgtgctgcccagctgttgagc
tacccaggaaataacaagatacccttgaactatcacatagtagaggtaatttttgcagag
ctgtttcagcttccctctccaccgcacatcgaggttatgtacacaacactcctgattgaa
ctgtgcaaacttcagcctggttctttaccacaagttcttgcacaagccacagaaatgctc
tacatgcgtttggatacgatgaatacaacctgtgtagacagattcattaactggttttct
caccacttgagcaacttccagttccgttggagctgggaagattggtcagattgtcttact
caggaccttgaaaagcccaaacccaaatttgtgagagaagttttggaaaaatgcatgcga
ctctcctaccatcagagaataatcgatattgttcctgcgagcttttctgtcctcagtcct
gcaaatccagtgtgtatctacaagtatggagatgaaagcaataggtctcttcctggatat
actgtggctctctgtttaacaattgcaattaaaaacaaggccagtaatgatgaaatcttc
agcattttgaaagatgtgcctaatccaaaccaggatgatgatgatgatgaaggatttact
ttcaatcctttgaaaattgaagtctttgttcagactcttctccatctagctgcaaagtct
ttcagccactccttcagcgccctggcgaagtttcacgaagtcttcaaaacgcttgctgaa
agtgatgagggaaaactccatgttttgagagttgtgtatgaggtctggaagaaccatcca
cagatgattgctgtgcttgtggacaagatgattcggacacaaattgttgactgtgctgca
gtagcaaactggatcttctcctcagagcttgcacacgattttactaggttttacatctgg
gagatcttgcattccacaattcgtaagatgaataagcacgttctgaagattcacaaagaa
ctggaagatacgaaggcaagattggccagacaacacaaaagacgagacagtgatgatgat
gaccggagcagcgatcgggaggacggacctctggaggagcagatagagcgcttgcaggag
aaggtcgagtcagcacagagcgagcagaagaatctcttccttgttatattccagcgcttc
attatgttgttaactgagcacttagtgcgctgtgagactggtggaattgatgtatttaca
ccttggtacaagagctgcatagaaaggctgcagcagatcttcctgcagcatcaccagata
atccagcagtacatggtgaccttcgagaacctcctatttacagctgagctggaccatcac
atactggctgtctttcagcagttctgtgctctgcaggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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