KEGG   Gallus gallus (chicken): 427838
Entry
427838            CDS       T01006                                 
Symbol
HNF1B
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
  KO
K08034  transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gga03000]
    427838 (HNF1B)
Transcription factors [BR:gga03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    427838 (HNF1B)
SSDB
Motif
Pfam: HNF-1B_C HNF-1_N Homeodomain Homeobox_KN APP1_cat
Other DBs
NCBI-GeneID: 427838
NCBI-ProteinID: XP_003642461
CGNC: 4099
Ensembl: ENSGALG00000005504
UniProt: A0A8V1AAZ9
Position
19:complement(8791188..8809295)
AA seq 557 aa
MVSQLSALQRELLGALLSSGATKEGLIRALEDMVPAAGFGVKLESLPLSPGGPPDGKPGF
VPLANGHGKGKLSGDEGSEDGDDFDTPQILRELQALNTEEAVEQRAEVDRMISEDPWRAA
KMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQ
FNQTVQGCENRTDKSSQDQLLFLFPEFNQQNQGAGQLDDACAETPSKKMRRNRFKWGPAS
QQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFAN
RRKEEAFRQKLAMDAYSSGQPTHSMNLLLSHGSPHHNQPSASPPSKMPGVRYGQGASSEA
ASSGAISHHGSGAMVTTSQAVLQQVSPAGLDPGHGLLSPDGKMISVSGGGLPPVSTLTNI
HSLSHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAALQPVQFSQQLH
SPHQQPLMQQSPSHMAQQPFMATVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSSI
STLTNMSSSKQCPLQAW
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggtgtcccagctgagcgccctgcagcgggagctcctgggcgccctgctcagctccggg
gccaccaaggaggggctgatccgcgccctggaggacatggtgcccgccgcaggcttcggc
gtcaagctggagagcctgccgctgtcccccggcgggccgcccgacggcaagcccggcttc
gtgccgctggccaacgggcacggcaagggcaagctgtccggcgacgagggctcggaggac
ggcgacgacttcgacacgccgcagattctccgcgagctgcaggcgctcaacactgaggag
gccgtggagcagcgggcagaagtggacaggatgatcagcgaggacccatggcgggcggcg
aagatgatcaagggctacatgcagcagcacaacatcccgcagcgcgaggtggtggacgtc
accggcctcaaccagtcgcacctctcgcagcacctcaacaaaggcacccccatgaagaca
cagaagcgggccgccctctacacgtggtacgtccgcaagcagcgggagatcctgcggcag
ttcaaccagacagtccaggggtgtgaaaataggacagacaaaagcagtcaggatcagctg
ctgtttctctttccagagttcaatcagcagaaccagggggctggccagctcgacgatgcc
tgcgccgaaacccccagcaagaagatgcgccgcaaccgcttcaagtgggggccggcctcc
cagcaaatcttgtaccaagcctacgaccgccaaaagaaccccagtaaggaggagcgggag
gcgctggtggaggagtgcaacagggccgagtgtctgcagcgaggggtgtccccctccaag
gcgcatggtcttggctccaacctggtgacggaggtgcgtgtctacaactggttcgccaac
cggcggaaggaggaagctttccgccagaagttggccatggacgcctacagctcaggccag
cccacgcacagcatgaacctgctgctgtcccacggctccccgcaccacaaccagcccagc
gcctcaccgcccagcaagatgccaggggtccggtacggccagggggcgagcagcgaggcg
gcatcctccggggccatcagccaccacggcagcggtgccatggtcaccaccagccaggcg
gtcctgcagcaggtctccccagccggcttggacccgggccacggtttgctctctcccgac
ggtaaaatgatctctgtgtcgggtggtgggctgccgccagtgagcaccctgaccaacatc
cacagcctgtcccaccacaacccgcagcagtcccagaacctcatcatgacgccgctctca
ggagtcatggccattgcacagagtctgaacacctcgcaggcacagagcgtccctgtcatc
aacagcgtggctggcagcttggcagccctgcagccggtgcagttctcgcagcagctgcac
agcccacaccagcagccactcatgcagcagtcgcccagccacatggcccagcagcccttc
atggccaccgtcacccagctgcagaactcgcacatgtatgcacacaagcaggagcccccc
cagtattcccacacctcccgcttcccctcggcaatggtggtgacagacaccagcagcatc
agcacactcaccaacatgtcttccagcaagcagtgtcccctgcaagcctggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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