KEGG   Gallus gallus (chicken): 428240
Entry
428240            CDS       T01006                                 
Symbol
CCDC160
Name
(RefSeq) POU domain, class 2, transcription factor 3 isoform X1
  KO
K09364  POU domain transcription factor, class 2
Organism
gga  Gallus gallus (chicken)
Pathway
gga05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gga00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    428240 (CCDC160)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gga03000]
    428240 (CCDC160)
   03021 Transcription machinery [BR:gga03021]
    428240 (CCDC160)
Transcription factors [BR:gga03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    428240 (CCDC160)
Transcription machinery [BR:gga03021]
 Eukaryotic type
  RNA polymerase III system
   Other transcription-related factors
    Octamer transcription factors
     428240 (CCDC160)
SSDB
Motif
Pfam: Pou Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 428240
NCBI-ProteinID: XP_015153671
CGNC: 53301
Ensembl: ENSGALG00000006673
Position
24:complement(3849616..3886070)
AA seq 507 aa
MLTWPCMATGNGAVGPVGSGPAPGSRGSSGWQRREGKLAAPGNLGLTAGGWAHRGFPPAS
RMVNLESVHAAVPEGERGPGCGGSHHFKEIKMSSDAADSTDTRHEPDQVEPGSEQNGLDF
NRQIKTEDLSDSLQSTIPPRSGHLVQGSSMMPGSQIAGDMSSLHTLQQLVLLPGHMQSVP
QFLLSQSQAGQQALQPNILSFPQQQGSLLLSQPGPSLASQAVGRSGLPGSSVEPHLDVPQ
HLQVAKHLTPSGASEEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTT
ISRFEALNLSFKNMCKLKPLLEKWLSDAESAPLDSSMSTPSSYPSVNEMFGRKRKKRTSI
ETNIRSTLEKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQKEKRISCPMPSPIK
SPIYNSRLVSTSGSLGPLSVNPVHSTMPGTVTSSCSPGNSSRPSSPGSALHASSPSTAQS
NSKAAMNSSGFNSSGSWYRWNQPTYLH
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgctcacctggccctgcatggcaacaggcaatggagctgtaggtcccgtcgggagcgga
cccgcgcccggttcgagaggcagcagcgggtggcagaggagggagggcaaactggcagcc
cctggcaacctggggctgacggcaggaggctgggcgcaccgcgggtttccccccgccagc
aggatggtgaacctggagtccgtgcacgcagctgtccctgaaggagaacgtggccccggg
tgtggtggcagccatcacttcaaggagatcaagatgagcagcgatgcggcggattccacg
gacacccggcacgaacccgaccaagtggagccaggaagtgagcagaatgggctggacttt
aacaggcagattaaaactgaagacctcagtgactccttgcaatctacaatcccccccagg
tcaggacaccttgtacagggatcctcgatgatgcctggaagccagatcgcaggggatatg
agctctctccacaccctgcagcagctcgtattgcttcccggccacatgcagtccgtcccc
cagttcctcctctcccagtcccaggcagggcagcaagccttgcagcccaacatcctttcc
ttcccccagcagcagggcagccttctcctctcccagccaggacccagcctggcatcacag
gccgtgggccgctctgggctccctggctcatccgtcgaacctcacctggatgtacctcag
cacctgcaagtggccaagcacctcactccatccggagcatctgaggagcccagcgacttg
gaggagctcgagaagtttgctaagactttcaaacaaaggcggatcaaactggggttcaca
cagggtgatgttggccttgccatggggaagctctatggcaacgacttcagccagactacc
atttcccgcttcgaggctctcaacctcagctttaagaacatgtgcaagctcaaacctctg
ctggagaagtggctgagtgatgcggaatctgctcctttggattcctccatgagcactccc
agctcctacccctccgtgaacgagatgttcggacggaaaaggaagaagcgaaccagcatt
gagaccaacattcgctccacgctggagaaaagattccaagataaccccaagcccagctca
gaggagatctccttgatagcagagcagctctccatggaaaaagaagtggttcgggtctgg
ttctgcaaccggcgccagaaggaaaaacggatcagctgcccgatgccatcccccatcaaa
tcgcccatctacaattccagactggtctctacctcagggtccttggggcccctctctgtc
aacccggtgcacagcaccatgcctgggacagtaacatcatcgtgttccccagggaactcc
agcaggccctcatcccctggcagtgccctccacgccagcagccccagcacagcccagagc
aactccaaagctgccatgaactcgtccggtttcaactcttcaggatcttggtaccgatgg
aaccaacctacctacctccactga

  All links  
Gene (14)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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