KEGG   Gallus gallus (chicken): 428359
Entry
428359            CDS       T01006                                 
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCIP135
  KO
K11861  deubiquitinating protein VCIP135 [EC:3.4.19.12]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gga01002]
    428359 (VCPIP1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    428359 (VCPIP1)
Enzymes [BR:gga01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     428359 (VCPIP1)
Peptidases and inhibitors [BR:gga01002]
 Cysteine peptidases
  Family C64
   428359 (VCPIP1)
Ubiquitin system [BR:gga04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   OTU
    428359 (VCPIP1)
SSDB
Motif
Pfam: VCIP135_N OTU OTU1_UBXL ubiquitin
Other DBs
NCBI-GeneID: 428359
NCBI-ProteinID: NP_001012966
CGNC: 11576
Ensembl: ENSGALG00000042883
UniProt: Q5ZIC1
Position
2:complement(115177827..115191152)
AA seq 1215 aa
MSQPRQQPPPPSPQQQQQPPPPAAAKKRERRIFSGTCPDPKCQARLFFPAHGPQGASSIE
CTDCGQRHEQRQLLAVEEVTDPDLVLHNLLRNALLGVSGAGPPRRNTELVKVLGLSNYHC
KLLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETVGYGKDRSGS
LIYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKHFE
ENLSHYKALFHDFIDVAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRPIILLD
SLSGMRSSGDYSATFLPGLVPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAALP
KLPRKLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLMRLVAAMEEVFMSKHGI
HPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLMCGALSEHHVPPEWLAP
GGKLYNLAKNTHGQLRPDKNYSFPLNNLVCSYSPAKDVLVPDYSLSSLTTCNWCHSNLVR
RVREDGSVLYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWSGRVVRETV
YWFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPVN
IDGAHAQRAGEVQQGQELESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIADQASV
MQKRKSEKMKQEHKGQPRTVSPGAVREGPSSAPATPTKTPYSPTSTKEKKIRITTNDGRQ
SMLTLKCTTTFLELQESIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQHGDRI
AIEILKGKEESSQPAAAHSAHAVKHDDVTVTSKISSKELQEQVDKEMYSLCLLATLMGED
VWSYAKGLPQLFQQGGVFYSIMKKTTGLVDGKHCTFPHLPGKNFVYNAAEDRLELCVDAA
GHFPIGPDVEDLVKEALSQVRAEATSRSREASPSHGMLKLGSGGVVKKKSEQLHNITAFQ
GKGHSLGTASGSQQHDQRAREAPLLRKHSTETDFSPAKIEPSVFPAASGKSELIRIAPGV
VTMRDGRQLDPTLIEAQRKKLQEMISSIQASMDRHLRDQNAEQSASVDVSQRKVEAVSST
AKTGSFQAGLPEPFSAPGGTEHLNTESAGDNMVNSVGTTFPARSKAQKGNSVEELEEMDS
QDAGITNVTEPMDHS
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgtcccagccccggcagcagccgccgccgccgtctcctcagcagcagcagcagccgccg
cctccggccgccgccaagaagcgggagcggcgcatcttctcgggcacctgccccgacccc
aaatgccaggcgcggctgttcttcccggcccacgggccgcagggcgccagcagcatcgag
tgcacggactgcgggcagcgacacgagcagcggcagctgctggcggtggaggaggtgacg
gaccccgacctggtgctgcacaacctgctgcggaacgcgctgctgggcgtcagcggcgcc
gggccgccccgcaggaacaccgagctcgtcaaggtgctgggcctctccaactaccactgc
aagctgctggcccccatcctggcccgctacggcatggacaagcagacgggcaaggccaag
ctcctcacggagatgaaccagggagacatcttcgactgctccctgctgggggaccgcgcc
ttcctcatcgagccggagcacgtcgagaccgtcggctacggcaaggatcgctccggcagc
ctcatctacctgcatgacactctggaagacatcaagaaggccaacaacagccaggagtgc
ctcattcccgtccacgtggatggggacggccactgtctggtccacgcggtctcgcgggcg
ctcgtgggcagggaactgttctggcacgcgctgcgagagaacctgaagaaacattttgag
gagaacctgagtcactacaaggcgctcttccatgattttatcgatgtggccgagtgggag
gatatcatcaatgagtgcgacccgttgtttgttcctccggaaggtgtgcccatgggcctt
aggaacattcacatttttggtctggccaacgtgcttcaccggcctatcatcctgttagac
tcactgagtggaatgcgaagctctggagactattcggcaacattcctccctggtctggta
cccctagaaaaatgtatgggaaaggatggcatgttgaacaagccgatctgcattgcctgg
agtagttcgggacgtaaccattatattcctctggttggaataaaaggtgctgctttacct
aaactgcctaggaagctcctgcctaaagcctggggagttccacaagacctcatcaaaaag
tacatcaagctagaggaggacggtggttgtgttatcggaggagacagaagcttgcaagac
aagtacttgatgaggctggttgctgcaatggaggaggttttcatgagtaaacatggtatt
caccccagtcttgtagctgatgtgcatcagtatttctacagaaggactggggtaatagga
gtccagccagaagaagtcacggcagctgccaaaaaagcagtgatggacaaccgccttcac
agatgcctgatgtgtggagccctttcagagcatcatgtgcctccagagtggttggctcca
gggggaaaactgtataatctggcaaaaaatacccacggtcagctacggcctgacaaaaat
tacagctttcctctgaacaacttggtgtgttcttacagccctgcaaaagatgtgctggta
ccagactacagcctgagtagtttgactacgtgtaactggtgtcacagtaacttagtgcgt
cgtgtccgagaagatggctctgttttgtatttggatggagacagaactaacactcggtct
acaggtggcaagtgtggctgtggattcaagcactactgggaaggtaaagagtacgataac
ctccccgaagcgtttcccattactctcgagtggagtggaagagtggtgagagagacggtc
tattggtttcagtatgaaagtgacacctctttgaacagcaatgtgtatgatgttgccatg
aagcttgtcaccaaacacttccctggtgagtttggtagcgagattcttgttcagaaagtt
gtcaacacgatattgcatcaaactgccaaaaagaaccctgatgattacacccctgtaaat
attgacggtgctcatgcccaaagagctggggaggtacagcaaggacaagagttagagtcg
caacttcctaccaaaattattttgactggacagaagacaaaaactttgcacaaggaggag
ttaaacatgagcaaaactgaaagaactattcagcagaacattgcagaccaggcctctgtg
atgcagaaacggaaaagtgaaaaaatgaaacaggagcacaaagggcagccaaggactgtg
tctccgggggctgttcgtgaggggccatcatctgcacctgctacgccaacaaaaacccca
tattcaccaacatctacgaaagaaaagaaaatccgaataacaacaaatgatgggaggcag
tccatgcttaccctgaagtgcactaccactttcttggaactacaggaaagcatagctaga
gagtttaatattcctccatatttgcagtgtattcgctatggttttcctcctaaagagctt
ttgcctcccaaagaaggcatggaaaatgaacctgtgcctttgcagcacggtgacagaatt
gccatagaaatcctgaaaggtaaggaggagagcagccagcctgctgcagcacactcagcc
cacgccgtgaaacatgatgatgtgacagtgaccagtaaaatctcatcgaaggagctgcag
gagcaagttgataaggagatgtactctctgtgtcttctagcgacactgatgggagaagac
gtctggtcgtatgcaaaggggcttcctcaattgtttcagcagggtggagtattctacagc
ataatgaagaaaaccacaggtttggttgatggcaagcactgtacttttccacatctgcct
ggtaaaaactttgtgtacaacgcagcagaagatcgattagagctgtgtgtggatgctgct
gggcactttcctatcggtcccgatgtcgaagacttggttaaagaggccttaagtcaggtg
cgagcagaagctacttcacggagcagggaagcaagtccatctcatggaatgctgaagctg
ggtagtggtggagtagtgaaaaagaaatctgaacagttacataacataactgcatttcaa
ggaaagggccattcgctaggaactgcatctggtagtcaacaacatgatcaaagagccagg
gaagcaccacttttaagaaagcatagtacagaaacagacttcagtcctgctaaaattgag
ccttctgtattcccagctgcttctggtaagagtgagctgatccgaatagctcctggagtt
gtgacaatgagagacggcaggcagctcgaccctactttgattgaggcacagagaaaaaag
ttgcaggaaatgatctcttctattcaggcttcaatggatagacatttgcgggatcagaat
gcagagcagtcagcatcagttgatgtatctcaaagaaaagtagaggcagtgagttcaact
gctaaaactgggagctttcaggctggcttgcctgaaccgttttctgcaccgggtggtact
gaacacttgaatactgagtcagctggtgataacatggtgaattctgtgggaacaactttc
cctgcaaggtctaaagcacaaaagggaaattctgttgaggagcttgaggagatggatagt
caagatgcaggaattactaatgtaactgagccaatggatcactcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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