KEGG   Gallus gallus (chicken): 770100
Entry
770100            CDS       T01006                                 
Symbol
TRIM47
Name
(RefSeq) tripartite motif-containing protein 47
  KO
K12023  tripartite motif-containing protein 47
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    770100 (TRIM47)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    770100 (TRIM47)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-C3HC4_2 zf-B_box zf-C3HC4_3 SPRY zf-RING_2 zf-RING_5 PRY zf-RING_10 Sina_RING SKA1 U-box DUF848 zf-RING_6
Other DBs
NCBI-GeneID: 770100
NCBI-ProteinID: XP_003642373
CGNC: 55772
Position
18:4630295..4638811
AA seq 681 aa
MEGAPGRAPPVPSAATAAALRLALAVPGLPDGPFGCPICLDLLKDPVTVPCGHNFCQGCL
GKLRGRTGPPDGAAGGAARCPLCQEPFPAALRLSKNRALCEVLPLLGAAGAGTSPDGART
PPAIPSPQSGPGSPPGSAGFSGTGPSGAESSPSEMAPGAEEEPGGEAELEEGTAAVLCDV
CPEGDRAAAARSCLVCLASFCGAHLEPHRRSPAFRSHRLVAPLRRLEEGLCPRHLQPLDG
FCRAEQTCVCVRCRANEHRGHDVVSLEKERELKEAQRAKFLSSVDNELEELAVTIAQTRK
MVELIKGVASKEKERVEKLFAEASELLATFQKEVAAFIEDSERSMLGETEADLRWKEERR
AKLAQGKQNLENIPSTDTIYFLQEFQALKIAMEDNLSPAPSFQNELNFTKCSQAVCAVKD
ALSAARKSQWDCLQGKGVDGMSFPKTEEAMTKSQFPDKSNNPACLESRDYFLKFAFIIDL
DSDTADKFIQLFGTKGAKRVLCPIPYPESPTRFINCEQVLGVNLMNRGNYYWEVELIDGW
VSIGVITEVFNPQDSYNHSRLGRNTSSCCLQWNGQNYAAWFGGLESVIQQPFFHTIGVFL
EYSEKALTFYGVKDSKMTCLKQLKAGSFAKAQSDPFQHKINQQFASLFSFKLKPAFFLES
VDAHLQIGPLKKDCVSVLKRR
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggagggagcgcccggcagagccccgccggtcccttccgccgccaccgccgcggctctg
cggttggcgttggccgtgccgggtttgcccgacggtcctttcggttgccccatctgcttg
gatctgctgaaggacccggtgacggtgccgtgcggccataacttctgccagggctgcctc
gggaagctccgcgggaggacgggcccccccgacggggcggcgggcggggcggcacgttgc
ccgctctgccaggagcccttcccggcggctctgcggctcagcaagaaccgcgccctgtgc
gaggtgctgccgctgctgggggccgccggagccgggacgtcccccgacggcgcgcggacc
cccccggctatcccatcccctcagtccgggcctggatccccccccggtagcgccgggttc
agcggaacgggacccagcggagccgagtcctccccctccgagatggcgccgggagctgaa
gaggagccggggggagaagcggagctggaggaggggactgcggcggtgctgtgcgacgtg
tgccccgagggcgatcgggcggcggctgcccgctcgtgcctggtgtgcctggcgtccttc
tgcggggcccacctggagccccaccgccgctcccccgcgttccgctcgcaccgcctcgta
gccccgttgcggcgcttggaagaagggctgtgcccgcggcacctgcagcccctcgacggc
ttctgccgggccgagcagacctgcgtgtgcgtccgctgccgcgccaacgagcaccgcggc
cacgacgtggtgtccctcgagaaggagcgcgagctgaaggaggcccagcgagccaaattc
ctcagcagtgtggacaacgagctggaggagctggctgtgaccatcgcacagaccaggaag
atggtggagctcatcaagggtgttgccagcaaggagaaggagcgggtggagaagctcttt
gcagaagcttctgagctgctggccaccttccagaaggaggtggccgccttcatcgaggac
agcgagcgctccatgctgggggagaccgaggctgacctccgctggaaggaggagaggaga
gccaagctggcccagggcaagcagaacctggagaacatccccagcaccgacaccatctac
ttccttcaggagtttcaagccttaaaaatagccatggaagacaacctctctccggctccg
agcttccagaacgagctcaacttcaccaagtgctcccaagccgtctgcgccgtcaaggat
gcgctgtcagctgcccgcaaaagccagtgggactgtttgcaggggaaaggagtggatggg
atgagcttcccgaagacggaggaagcaatgaccaagtctcaatttccagacaagtcgaac
aatcccgcctgcctggagagccgcgattacttcctgaaatttgccttcatcatcgacctg
gacagcgatacggccgacaagttcatccagctcttcggcaccaagggagccaagcgggtg
ctctgccccatcccctacccggagagcccgacccgtttcatcaactgcgagcaagtgctg
ggcgtgaacctcatgaaccggggcaactactactgggaggtggagctcatcgacggctgg
gtcagcatcggcgtcatcaccgaggtcttcaacccgcaggactcctacaaccacagccgc
ctgggccgcaacacgtcgtcctgctgcctgcagtggaacgggcagaactacgccgcctgg
ttcggtggcttggagtccgtcatccagcagccatttttccacacgatcggggtcttcttg
gagtattcggagaaggctttgaccttctatggagtcaaggactctaagatgacgtgtctg
aagcagctgaaggccggctcttttgcgaaggcccagtcggaccctttccagcacaagatc
aaccagcagtttgcatctctgttctccttcaagctgaaaccggccttcttcctggagagc
gtcgatgcccacctgcagatcgggcctctgaagaaggattgcgtgtcggtgctgaagcgc
aggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (16)   
   Pfam (16)   
All databases (70)   

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