KEGG   Gossypium hirsutum (upland cotton): 107890841
Entry
107890841         CDS       T04793                                 
Name
(RefSeq) cyclin-dependent kinase D-3
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03022  Basal transcription factors
ghi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107890841
  09124 Replication and repair
   03420 Nucleotide excision repair
    107890841
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ghi01001]
    107890841
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107890841
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107890841
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107890841
Enzymes [BR:ghi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     107890841
    2.7.11.23  [RNA-polymerase]-subunit kinase
     107890841
Protein kinases [BR:ghi01001]
 Serine/threonine kinases: CMGC group
  CDK family
   107890841
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107890841
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     107890841
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107890841
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase Seadorna_VP7
Other DBs
NCBI-GeneID: 107890841
NCBI-ProteinID: XP_016670908
UniProt: A0A1U8I5A1
Position
D09:47762508..47771055
AA seq 410 aa
MDPSKKVADRYLKREILGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIK
LLKELKDPNIIALIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYIQMTLKG
LAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAPELL
FGTKQYGAGVDVWAAACIFAELLLRRPFLQGTSDIDQLGKIFAAFGTPTPSQWPDMVYLP
DYVEYQYVPAPPLRSLFPMASDDALDLLSKMFTYDPKARITVQQALEHRYFSSAPLPTDP
AKLPRPTPKSRPSDFNPQEGPTVLSPPRKSRRVMPDRDRFEGNSNLLEKIDDHVGEARLA
VGDHAGKSDQVPMSVDFSIFGSKPLSRPTINSADRSHLKRKLDLEFQHND
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggatccgtcgaagaaagtggcggataggtatttgaagcgcgagattcttggtgaaggt
acttacggtgttgtctacaaagccattgatactaagacgggacagactgttgcaattaag
aaaattcggctggggaagcaaaaggaaggggtgaattttactgcactcagagaaattaaa
ctgcttaaggagcttaaagatccaaatataattgctttaatagatgcattcccacacaag
ggtaatttgcatcttgtgttcgagttcatggagactgaccttgaagctgttattcgagat
cgtaatatattcctctcaccagctgatatcaaatcctacattcagatgactttgaaaggg
cttgctttttgccacaagaaatgggttttacacagggatatgaagccgaataatttgcta
ataggatccaatggacaacttaaacttgcagattttggtttagcacgcatatttggcagc
ccagatcgtaagtttactcaccaggtctttgctcgatggtacagagctcctgagttactt
tttggtaccaagcaatatggtgctggtgtggatgtttgggcagctgcctgtatatttgct
gaacttctcctccgtcgaccatttctgcagggtacaagtgacatcgatcagttaggaaag
atctttgcagcttttgggacaccaacgccctctcagtggccagatatggtatacctgcct
gattatgtagaataccaatatgttcctgcaccacctttgcgttcattgtttccaatggcc
agtgatgatgctttagatcttttatcaaagatgtttacttatgacccaaaagctaggatt
acggtgcagcaagcattagagcacaggtatttttcatctgctcctctacctacagatcca
gctaagctccctaggcctacccctaaatctcgtccgtcagattttaatccccaggaaggt
cccactgtgctttctcccccacgaaaatctaggagagtaatgccagatcgtgacagattt
gaaggtaattccaacctattggagaagattgatgaccatgttggtgaagcaagactggca
gttggtgaccatgcaggaaagagtgaccaggtgccaatgtcagtagatttttcaatcttt
gggtcgaaacctctcagtagaccgacaattaacagtgctgacagatctcatctgaagagg
aaacttgatcttgaattccaacacaatgattaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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