KEGG   Gossypium hirsutum (upland cotton): 107891682
Entry
107891682         CDS       T04793                                 
Name
(RefSeq) periodic tryptophan protein 2
  KO
K14558  periodic tryptophan protein 2
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107891682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ghi03009]
    107891682
Ribosome biogenesis [BR:ghi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    107891682
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 RMC1_N NBCH_WD40 eIF2A WD40_like Utp21 WDR54
Other DBs
NCBI-GeneID: 107891682
NCBI-ProteinID: XP_016672026
UniProt: A0A1U8I1A7
Position
D09:36003877..36008303
AA seq 890 aa
MNYRFQNLLGAPYRGGNAVVTQNTNLISPVGNRVSVTDLVKSQTITLPIQSSSNIRRIAA
SPDGVFLLTVDDNNRCLFINLPRRVVLHRITFKHPVNAVKFSPNGKYIAVAAGKLLQIWK
SPGFKREVFAFELVRTFADCNDKILSMDWDNESKYLIVGSKDLTGRLFFVDKKKGNYKKP
FLFLGHRDSLVGCFFGVDKKKNRVDKAYTIARDGFIFSWGYSGNDVNRDARDDDLMDVEP
PSPGTPEREGEDGERIGKKRKDSDGKESGFSEGEGYLNGDKWELLRKDCFMQAPAKVTAC
DYHKGLDLVVVGFSNGVFGLYQMPDFVCIHLLSISREKLTTAVFNDLGNWLTFGCAKLGQ
LLVWEWRSESYILKQQGHYFDVNTLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFSEH
TNAVTALHFMANNHCLLSASLDGTVRAWDLLRYRNFRTFTAPSHKQFVSLAADQSGEVIC
AGTLDSFEIFVWSMRRNLLLEVLSGHEGPVHGLMFSPTDAILASSSWDKTVRLWNVFKEK
GAVETFRHTHDVLTLTYRPDGKQLACSTLDGQIHFWDPIDGESMRSIEGRRDIAGGRLMS
DRRSAANSSSGKCFTSLCYSADGSYILAGGNSRYICMYDVSDQVLLRRFQITHNLSLDGV
LDFLNSKHMTEAGPLNLIDDDNSDTEEGIDKQTRGNVGYNLPGSMPNNGRPVIRTKSLKI
APTGRSFSAATTEGVLVYSIDDSFIFDPTDLDIDVTPEAIDAALNEEQPSRALILSLRLN
EDSLIKKCIFSVNPADVPAVASSIPYRYLQRLVEALTNLLERCPHLEFVLQWCQELCKLH
GNSIQQNSRNLQPVLKSLQKAITRIHQDLADTCALNEYMLRYLCSVSVKK
NT seq 2673 nt   +upstreamnt  +downstreamnt
atgaattaccgattccaaaacctcttaggcgccccttaccgcggcggaaacgccgtggta
acacaaaacaccaacctaatctcccccgtaggtaaccgcgtctccgtcaccgacctcgtc
aaatcccaaaccattaccctacccatccaatcctccagcaatatccgccgcatcgctgct
tcacctgacggcgtttttctcctcaccgttgacgacaacaaccgttgcctcttcatcaac
ctccctcgtagagtggtgttgcatcgcataacgttcaaacatccagtaaacgccgtcaag
tttagccccaatgggaaatacatagctgttgcagcgggtaagttgttgcaaatatggaaa
tctcctgggtttaagagggaagtttttgcgtttgagttggttagaacattcgctgattgc
aatgataagatattgtcaatggattgggataatgaatcgaaatatttgattgttgggtct
aaagatttgactgggaggttgttttttgtggataaaaaaaagggtaattataaaaaacca
tttttgtttcttggtcatagggattctcttgttggttgcttctttggtgttgataagaag
aagaatagagttgataaagcatatactattgctcgtgatggttttatttttagttggggt
tatagtggaaatgatgttaatcgtgatgccagagatgacgatctgatggatgtggagcca
ccctctccaggaacgccggagagggaaggtgaagatggggaaagaattggtaagaaaagg
aaggattctgacgggaaagaaagtggatttagtgaaggtgaggggtatttgaatggagac
aaatgggaattgttgaggaaagattgttttatgcaagctcctgcgaaagtgaccgcatgt
gattatcataagggacttgatcttgttgtggtgggattctcgaatggggtttttggatta
tatcagatgccggattttgtttgcatacatttgttgtcgatatcaagagagaagcttaca
acagctgtgttcaatgaccttggaaattggttgactttcggctgtgcaaagttggggcag
ttgttggtttgggagtggcggtcagagagttatatattgaagcaacagggacactacttt
gatgtgaatactctggcatattcgccggattcacagctcttggctactggagccgatgat
aataaagtgaaggtatggaccgtatcgtcaggcttttgcttcgtaacattcagtgagcat
actaatgcggttactgcactccattttatggctaataaccattgcctcttaagtgcatct
ctggatgggactgttcgtgcatgggacctgttgcgttatcgaaattttagaacatttact
gccccttctcataagcagtttgtttctttggcagctgatcaaagtggtgaagtgatttgt
gcgggaactctagattctttcgagatttttgtttggtcaatgaggagaaaccttctattg
gaggttcttagtggtcatgaaggtccggttcatgggctgatgttttctcctacagatgca
atattagcttcatcatcatgggacaaaactgtccggttatggaatgtatttaaagaaaaa
ggcgctgttgaaacattccgacacacacatgatgttctgacccttacttaccgaccggat
gggaagcaactagcatgcagcacattagatggacagattcacttttgggaccctattgat
ggcgagtcaatgcgctccattgaaggccgtagggatatagctggaggacgactcatgagt
gatagacgatctgcagctaactcaagttcaggaaagtgtttcacaagcttatgttactct
gctgatgggagttacatcttagctggaggaaatagcagatatatctgtatgtatgatgtt
tctgatcaggttctacttcgacgatttcaaataactcataacctctctttggatggagtt
cttgacttcttaaactcgaagcatatgacagaagctggtccattgaatttaatcgatgat
gataacagtgacacagaagaaggtattgacaagcaaacccggggaaatgtgggatataat
ctaccaggatccatgcctaataatggaaggcctgtcatccgaacaaaatcccttaaaatt
gctccaacaggacgaagcttctcagcagcaacaacagagggtgttcttgtttattcaatc
gatgactcatttatcttcgatcccacagatctcgacatcgatgttacaccggaggccata
gatgcagcacttaatgaagaacagccaagccgagctttaattcttagcttgcgtttaaat
gaagattcactaattaaaaagtgtattttctctgtcaatcccgctgatgttccagccgtt
gcttcatcaatcccttatcggtacttgcaaagattagttgaggctttaaccaaccttctt
gaaaggtgcccgcacttagagttcgtgcttcaatggtgtcaggaactctgcaaacttcat
ggcaactctattcagcagaattccagaaatcttcaacccgttctaaaatcattgcagaag
gcaatcaccagaattcaccaggatttagcagatacatgtgctctgaatgaatatatgctt
cgatatttatgctctgtgagtgtcaagaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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