KEGG   Gossypium hirsutum (upland cotton): 107893603Help
Entry
107893603         CDS       T04793                                 

Definition
(RefSeq) protein HASTY 1-like
  KO
K14289  exportin-5
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  RNA transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    107893603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ghi03016]
    107893603
   03036 Chromosome and associated proteins [BR:ghi03036]
    107893603
Transfer RNA biogenesis [BR:ghi03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    107893603
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     107893603
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Xpo1
Motif
Other DBs
NCBI-GeneID: 107893603
NCBI-ProteinID: XP_016674127
UniProt: A0A1U8I7G1
Position
15
AA seq 1214 aa AA seqDB search
MDEGNKNSIGNNVARAIVAALDWNSTPDARKAAVSYLESIKAGDIRVLANTSFRLVKKDW
SSEIRLHAFKMLQHLVRFRWEEVGPLEHRNFANATFELMSEIADTCEEWALKSQTAALVA
EIVRREFLNLWQELLPSLVSLSSKGPVQAELVSMMMRWLPEDITVHNEDLEGDRRRLLLR
GLTQSLPEIFPLLYTLLERHFGAAMSEVGRQQLDIAKQHAAAVTTTLNAVNAYAEWAPLS
DLSKYGIIHGCGFLLSSPDFQLHACEFFKLVSPRKRPVDDSASDFDSAMSSIIQILMNVS
REFLVRSSPAGGAIDESDYEFVEYVCESMVSLGSSNLQCIVGDSTTFSLYLQQVLGFFQH
FKLALHYQSLQFWLVLLRDAMSKPKLSVHSSGDGLTATNVDSTLAQVDEEKRKILSFLND
DICSTILDISFQRMLKKEKLMTETALSPGILELWSDDFEGKGDFGQYRSRLFELIKFIAS
NKPLVAGAKVSERIIMIIKSLLNSPMPSQDLAMMESMQMALENVIISIFDGSNEFAGGSS
EVHLALCRIFEGLLRELLSLNWTEPALVKVLGHYLEAMGPFLKYFPDAVASVINKLFELL
NSLPFIVKDPSTSSARHARLQISTSFIRIAKAADKSILPHMKGIADMMACLQREGRLLRS
EHNLLGEAFLVMASTAGIQQQQEVLAWLLEPLSQQWMQIEWQNNYLSEPLGLVGLCSERA
FMWSLFHTVTFFEKALKRSGTRKGNSNLQNSSTAISTPHPLASHLPWMLPPLLKLLRGIH
SLWSPSVFQMLPGEIKAAMSMSDVEQSSLLGGGNPKLSKGALTFVDGSQFDMNKEGYIKP
NEADIQNWLKGIRDSGYNVLGLSTTIGDPFFKCIDIDFVSLTLIENIQSMEFRHTRLLVH
SILILLIKSCPLDMWEVWLERLLHPLFIHCQQALSCSWSSLLHEGRAKVPDNHGILTGSD
LKVEVMEETLLRDLTREICSLLSTIASPGLNASLPSLEHAGHVGRVDTSSLKDLDAFASS
SMVNFLLKHKSLAIPVLQISLEAFSWTDSEAVTKVCAFSAAVVLLAIFTNNVDLREYVSR
DLFSAVIQGLALESNAVISADLVSLSRDIFIYLCNRDPGPWKILLSLPCISPNDLHAFEE
ALTKTASPKEQKQLMKSFLLLATGNNLKALAAQKCVNIITNVTDKPRSSVNAPENRIDEG
ETVGLAAIVKGIWF
NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt
atggatgaaggcaacaaaaacagcataggaaacaatgtggccagagccattgttgctgct
cttgattggaactccactcccgatgctcgcaaagccgccgtttcttaccttgaatcgatt
aaagcaggagatatacgggttttggcaaacacatcattccgtttagtgaaaaaagattgg
tcttcagaaattcgcttacatgcatttaaaatgctacagcacttggttcggtttcggtgg
gaggaagttggtcctttagaacatagaaactttgcaaatgctactttcgagttaatgtct
gaaattgcagacacttgtgaggaatgggctttgaaaagtcaaactgctgcacttgttgct
gagattgttagaagagaatttctaaatctttggcaggagctgcttccctctcttgtttcc
ctatccagcaaaggccctgtacaagctgaattggtctccatgatgatgagatggttacct
gaagatattacagtccacaatgaagatttggaaggtgatcggcgtaggttactgttacgt
gggcttactcaatctttgccagaaatttttccactactgtatacgttactggaaaggcat
tttggagctgcaatgtctgaggtgggtagacaacaacttgatattgcaaaacagcatgca
gctgctgtaacaactactttaaatgctgttaatgcctatgctgaatgggctcctttgtcc
gatctttctaagtatggcatcattcacgggtgcggttttctactttcttctcccgatttt
cagcttcatgcttgtgagtttttcaaacttgtctctccaagaaagagacctgtggatgac
tctgcttctgacttcgattccgcaatgagtagcatcattcaaatcttgatgaacgtatcc
cgagaatttttggtcagatctagcccagctggtggggctatagatgaaagtgactacgag
tttgtggaatatgtatgtgaaagtatggtgtctttgggttcctcaaatttgcaatgtatt
gttggagatagcactacattctcactctatttacagcaggtcttgggtttttttcaacat
tttaagctagctcttcattaccaatccctgcaattttggttggtgctgttgagggatgca
atgtcaaagccaaagctttcagtacattcatctggagatgggttgactgctaccaatgtg
gactctactttggctcaggttgatgaagaaaagagaaagattttaagttttctgaatgac
gatatttgtagtacaattctcgatatatctttccaacgcatgcttaagaaagaaaagctc
atgactgaaacagccctttctccggggattttggaattgtggagtgatgattttgaaggc
aagggtgattttggccagtaccgttctaggctgtttgagttaatcaagtttattgcttca
aacaagcctcttgtggctggtgctaaagtttctgagagaattattatgatcattaagagc
ctcttgaattctccaatgccatctcaggacttggctatgatggaaagcatgcaaatggct
cttgaaaatgttatcatctctatttttgacggatcaaatgagtttgccgggggtagttca
gaagttcacctggctttatgtagaatatttgaaggattacttcgggaacttctttctttg
aattggactgagccagcccttgtgaaagtacttggccactatctagaagcaatgggtccc
ttcctcaagtattttcctgatgcagttgccagtgtcatcaataagctttttgagctccta
aattcacttccttttattgttaaggatccttcaacgagcagtgcacgacatgcaaggttg
cagatttctacgtcatttattcgaatagcaaaagctgctgataaaagtattctgcctcat
atgaagggtattgctgatatgatggcatgtttgcaaagagaaggtcgtttgcttcgtagt
gaacataatcttcttggtgaagcatttcttgtcatggcttctactgcagggattcaacag
cagcaagaagttttggcatggttactcgaacctttgagccaacagtggatgcagatagag
tggcaaaataattacttgtctgaacctcttggtctagttggtttatgctctgagagagca
tttatgtggtcacttttccacactgtgacattcttcgagaaagcacttaagaggagcgga
acaaggaaaggcaattctaacttacagaacagctcaacagcaatttctactccacatcca
ttagcttctcatctgccgtggatgcttcctcctctcttaaaactgcttcgtggtatacat
tccctttggtcaccatctgtattccaaatgttacccggagaaatcaaagcggcaatgagc
atgagtgatgtggagcaatccagtcttcttggtggtgggaacccaaaattgtcaaagggt
gcattaacttttgtagatggatctcagtttgatatgaataaggaaggatatatcaaacca
aacgaggctgacatacaaaattggctaaagggtattcgagacagtgggtacaatgtattg
ggcctatctacaaccatcggggatccgtttttcaagtgcattgacattgattttgtttct
ttaactctaatcgaaaatatacagtcaatggagttcagacatacgcggctgcttgttcat
tctattttgattctgctaattaagtcctgtcctctggacatgtgggaggtgtggcttgaa
aggctattgcacccattatttattcattgtcagcaagctctaagctgttcatggtccagt
cttttgcacgaaggccgagcaaaggtccccgataatcatgggattctcaccgggtctgac
ttgaaggtggaagtaatggaggagacactgcttcgagatttaactcgtgagatatgttca
ctcctctctactatagcatcacctggattaaatgccagccttccttcgttagaacatgct
ggccatgttggccgtgttgacacatcttctctgaaagatttggatgcatttgcttcgagc
tctatggtcaatttccttttaaagcacaagagcctggcaattccagtgttacagatttct
ttagaagcattttcttggaccgacagtgaagcagtgaccaaagtttgtgctttctctgct
gctgtagttcttctagctatatttacgaataatgtggatctcagggaatatgtttcaagg
gatctattttctgctgtcattcaaggtctggcccttgagtcaaatgctgttatcagtgcc
gatcttgttagtctttctcgtgacatattcatatatctatgtaacagagatccaggcccc
tggaagattttactctccctcccatgtattagccccaatgacttacatgcctttgaagaa
gccttgacaaagacggctagtccgaaagaacaaaagcagcttatgaagagcttcctttta
ttagctacagggaacaacttaaaggctcttgctgctcagaaatgtgtaaacattataaca
aatgtcacagataagccacgtagttcagtcaatgctccagaaaatagaatcgatgagggg
gaaactgtaggattggcagctattgtgaagggtatttggttttag

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