KEGG   Gossypium hirsutum (upland cotton): 107896635
Entry
107896635         CDS       T04793                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 11 isoform X3
  KO
K03135  transcription initiation factor TFIID subunit 11
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107896635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107896635
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107896635
SSDB
Motif
Pfam: TAFII28 T3SS_basalb_I
Other DBs
NCBI-GeneID: 107896635
NCBI-ProteinID: XP_016677326
UniProt: A0A1U8IGQ4
Position
A10:98924528..98930421
AA seq 228 aa
MKQSKDPFEAALEEQEESPPNSPVGEDELNSQTPNEPQNQTNGGHNLLVDDDDYDEIGPN
VKNSSHPSSTSTCKLHSTIVNANVATGATTKNKEYDDDEEEENMEVELSKFPSSADPTKM
AKMQAILSQFTEDQMSRYESFRRSALQRSNMRRLLVSITGSQKISLPMTIVVCGIAKMFV
GELVEKARIVMTERKESGPIRPCHIREAYRRLKIEGKVPKRSVQRLFR
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaagcaatcaaaggatccattcgaagcagcattggaggagcaagaggaatcgccgcct
aattccccagttggtgaggatgagctgaacagccaaactccaaatgaaccccagaaccaa
accaatggtggacacaatttgcttgtagatgatgatgattacgatgaaattggtcccaac
gtaaaaaattcctctcatccatcatcaacttcaacttgtaagttgcactctacaattgtt
aatgctaatgttgctactggagccaccaccaagaacaaagaatacgatgatgacgaagag
gaggaaaacatggaagttgagcttagcaagttcccttctagtgctgaccctactaaaatg
gccaagatgcaagccattttatcgcaattcacagaggatcagatgagtagatatgaatca
tttaggagatctgcgcttcaaaggtctaacatgagaaggttgttggtaagcataactggc
agccagaaaatttctttaccaatgaccattgtcgtgtgtggtatagcgaaaatgttcgtc
ggtgaactcgttgagaaagctagaatagtcatgacagagagaaaagaatccggaccaatc
aggccttgccacattagagaagcttatagaagattgaagattgaaggcaaagtgcctaag
agatcagtgcaaaggctgtttcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (14)   
   RefSeq(nuc) (12)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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