KEGG   Gossypium hirsutum (upland cotton): 107899987
Entry
107899987         CDS       T04793                                 
Name
(RefSeq) tubulin beta-5 chain
  KO
K07375  tubulin beta
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04145  Phagosome
ghi04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107899987
  09142 Cell motility
   04814 Motor proteins
    107899987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    107899987
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ghi04812]
    107899987
   04147 Exosome [BR:ghi04147]
    107899987
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     107899987
Cytoskeleton proteins [BR:ghi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    107899987
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107899987
  Exosomal proteins of colorectal cancer cells
   107899987
  Exosomal proteins of bladder cancer cells
   107899987
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 107899987
NCBI-ProteinID: NP_001313813
UniProt: Q6VAF7
Position
A03:complement(25584558..25588248)
AA seq 445 aa
MREILHIQGGQCGNQIGAKFWEVICDEHGVDNTGKYNGDSDLQLERINVYYNEASGGRYV
PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTACAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESDMNDLVA
EYQQYQDATADDEYEEGEEEEEEAA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagagaaatcttgcacatccaaggtggtcaatgtgggaaccagatcggggctaagttc
tgggaagtcatatgcgacgagcatggagttgacaacactggaaaatataacggtgactcc
gaccttcagttggagcgcatcaatgtctactacaatgaagccagtggtggaaggtatgtc
ccacgcgctgttctcatggatctggagccgggcactatggattccgtcagatctggtcct
tttggacaaatctttcgccccgataacttcgtcttcggacagtctggtgctggcaacaac
tgggccaagggtcattacacggagggagctgagctcattgattctgttcttgatgttgtc
aggaaagaggctgagaattgtgattgcttgcaaggatttcaagtttgccattctttgggt
ggtggtactggatctggaatgggaacccttcttatttccaagatcagggaggagtatcca
gatcgcatgatgttgacattttcggtcttcccttctcccaaggtatctgatacagttgtt
gagccatacaatgcgaccctttctgttcatcagcttgtggaaaatgctgatgaatgtatg
gtgttggacaatgaggctctatatgatatctgcttccgtactctcaagcttgccactcca
acttttggtgatcttaaccacctcatatctgctaccatgagtggtgtgacatgctgtctg
cggttccctggacagctaaactctgatctccgcaagctggccgttaaccttatccccttc
ccacgattacacttcttcatggttggatttgctcccttgacatccagaggatcacagcag
taccgggcactgactgtgcctgaactgactcagcagatgtgggatgctaaaaacatgatg
tgtgctgctgacccacgccatggccgttacctaactgcctgtgcaatgttccgtggtaag
atgagcactaaggaggttgatgagcaaatgattaatgtccagaataagaactcgtcgtac
tttgtggagtggatccctaataatgtcaagtctagtgtgtgtgacatcccacctaagggt
ctgaaaatggcatccactttcattggaaattcgacctcaattcaggagatgtttaggagg
gttagtgagcagtttacagcaatgttcagaaggaaagctttcttgcactggtacacgggc
gagggaatggatgagatggagtttacggaagctgagagcgacatgaatgatttagttgca
gagtaccagcaataccaggatgcaactgctgacgacgagtatgaggaaggagaggaagaa
gaagaggaagctgcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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