KEGG   Gossypium hirsutum (upland cotton): 107904472
Entry
107904472         CDS       T04793                                 
Name
(RefSeq) high mobility group B protein 6
  KO
K09273  upstream-binding transcription factor
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ghi03000]
    107904472
   03021 Transcription machinery [BR:ghi03021]
    107904472
Transcription factors [BR:ghi03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   UBF
    107904472
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    UBF
     107904472
SSDB
Motif
Pfam: HMG_box HMG_box_2 CHDNT W_rich_C
Other DBs
NCBI-GeneID: 107904472
NCBI-ProteinID: XP_016686348
UniProt: A0A1U8JCE3
Position
D11:1929493..1931757
AA seq 491 aa
MADTAVVVDVPRKSRNNGRKALKQKNPSSSSPSLSTNEANILAQKLSQQLSPTQAPSPMK
SDPSKENHDGLSQPLKGKAAGKGKQSKKSFEKDLQEMQDMLQKLRIEKEKTEELLKEKDE
MLKMKDEEIENKGKEQEKLQMELKKLQKMKEFKPNMKFAISMNKGGGFEKKRPSPPYILW
CKDQWKEIKKENPEADFKEVSNILGAKWKTIMAEEKKPYEEIYRAEKEVYLQAIAKEKRE
TEAMKLFEDEHKQKTAMELLEQYLQFKEEAEKETKKKTKKERDPLKPKQPMSAFFLFSNE
RRAALLADNGNKNVLEAAKIAGEEWKNMTAEQKKPYEEIAKKNKEKYMEEMEVYKQKKEE
EALNVKKQEEEMMKLQKQEALQLLKKKEKTDHIIKKTKEKRQQKKQQNSDPNKPKKPASS
FLLFSKEARKTLVQERQGINNSTLNALISVKWKELSEEERDVWNAKASEAMEVYKKQMEQ
YNKSAEEEQQH
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcggatacagctgttgttgttgatgtgccaaggaaatcaagaaacaatggaagaaaa
gccttgaaacagaagaacccatcatcatcatcaccatcattatcaacaaatgaagccaat
attttggcacaaaagctctcacagcagctttccccaacacaggctccttctccgatgaaa
tcagatccgtcgaaagagaaccacgacggactctctcaacctctcaaaggaaaagccgcg
ggcaaagggaaacagagcaagaaatctttcgagaaagacttgcaagaaatgcaagatatg
cttcaaaagctaaggatagagaaagaaaagaccgaagagttattgaaagagaaagatgaa
atgttgaagatgaaggatgaagagattgaaaataaaggtaaagagcaagagaagttgcaa
atggagctgaagaaattgcagaaaatgaaggaattcaagcctaatatgaaattcgcaatt
tcgatgaacaaaggaggaggatttgaaaagaaaaggccatctccaccttacattttgtgg
tgcaaagatcaatggaaagagataaagaaagagaatcccgaggctgatttcaaagaagtt
tcgaatattttgggtgcgaaatggaagacgatcatggccgaagaaaagaagccttacgaa
gagatatatcgagccgaaaaggaagtgtatttacaggcgattgcgaaagagaaacgcgag
acggaagccatgaaactctttgaagatgagcataaacaaaagacagcaatggagttactg
gaacaatacttgcagttcaaggaagaagctgagaaagaaaccaagaaaaaaaccaagaaa
gaaagggatcccttaaagcctaagcaacccatgtcggctttctttttgttctccaacgag
agaagggcggctttactcgccgataacggaaacaagaacgttttggaagcggcgaaaatc
gcgggcgaagaatggaagaacatgactgcagaacaaaaaaagccttatgaagagatagca
aagaagaacaaggaaaaatacatggaagaaatggaggtttacaagcagaaaaaggaagaa
gaagcattgaatgttaaaaaacaagaagaagagatgatgaaactacagaaacaagaagca
cttcaattgcttaaaaagaaagagaaaactgatcatatcattaaaaaaaccaaagagaaa
cgtcaacaaaagaagcagcagaattcagatcctaataaacctaaaaagcctgcatcttct
ttccttttgttcagcaaagaagcaaggaaaactctggtacaagaacgacaaggaatcaac
aactctacacttaatgccctgatttcagtgaaatggaaggagcttagtgaagaagaaagg
gatgtttggaatgcgaaagcaagtgaagccatggaagtatacaagaaacaaatggaacaa
tacaacaaatctgcagaggaggagcagcagcactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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