KEGG   Gossypium hirsutum (upland cotton): 107905455
Entry
107905455         CDS       T04793                                 
Name
(RefSeq) cyclin-T1-3
  KO
K15188  cyclin T
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107905455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107905455
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     107905455
    Brd4/P-TEFb complex
     107905455
    7SK RNP complex
     107905455
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C TFIIB
Other DBs
NCBI-GeneID: 107905455
NCBI-ProteinID: XP_016687601
UniProt: A0A1U8JBB4
Position
D05:17291887..17295353
AA seq 477 aa
MDSTCAASMCLPEQPHSSMRKWYFSREEIENHSPSRKDGIDLGREEQLRKSYCSFLQELG
MKLKVPQVAIACAMMLCHRFYMRQSHAKNDWQTIATVSTFLACKIEETPRLLRDVIVVGY
EIIYKRDPSAPGRIRQREVYDKQKELILTGERLLLATISFDLDIELPYKSLVAAVKRLEI
FPNLLKVAWNFVNDWLRTTLCLQYKPHYIAAGSMCLAAKFQKVKLPMEKGKVWWLEFDIS
PKQLQEVTQQMVRLLEQDKRRALSSRHERASLSASLAGNAMTQSCTLSASVGTQSGAGAE
SSKVSKSMDNCASQDCVKEVFPHRTSDDGASGGVEDGSGTGQPRTEESDQNQSLNIVSSV
ACDNKQASAKESLPSQTSDSGASTVVDNAEGDCELRTEESHHLNPSIKIVSICNTFSKSD
ADRIREIFKRRRCDRAANLKRTKVRDDEVDSEAWIERELEMGIELESATSRKRGRVH
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggattcaacttgtgcagctagcatgtgtttaccagagcagccgcattcatctatgcgc
aagtggtacttcagccgagaagaaattgagaaccattctccatctaggaaggacggaatc
gaccttggaagagaggagcagttgcgtaagtcgtattgttcttttcttcaagagcttgga
atgaagcttaaagtgcctcaagtagcaatagcatgtgcaatgatgctgtgtcaccgattt
tacatgcgccaatcccatgcaaagaatgattggcagaccattgcaactgtaagcacattt
cttgcatgcaaaatagaggaaacaccacgcttgctgcgggatgttattgttgtgggctat
gaaattatctataaacgggatccttctgctccaggaagaatcagacaaagagaagtttat
gataagcagaaggaattgatcttgactggggagaggcttttgttggcaacgatttctttc
gatcttgatatcgaactcccttacaagtcccttgttgcagctgtgaagagattggaaatt
tttccgaacctcttaaaagtggcatggaattttgtgaatgattggcttcgtacaaccttg
tgcttgcaatacaaaccccattacattgcagctggttccatgtgtcttgctgctaaattt
caaaaagttaagcttccaatggagaagggaaaagtatggtggttggaatttgatatttca
cctaaacagttacaagaggtcactcagcagatggtcaggttgttagagcaagacaaaaga
cgagctttatcgtcaagacatgagagggccagtctatctgcttctttagctgggaacgca
atgacgcaatcatgcaccttgagtgcatcagttggtactcagtctggtgctggagctgag
agtagtaaagttagcaaatcaatggacaattgtgccagccaagattgtgtgaaagaagtt
ttcccacatcgaacaagtgatgatggcgcaagtggtggtgttgaggatggcagtggtacg
ggtcagccaagaacagaggaatctgaccagaaccaaagtttgaatattgtttcatccgtt
gcctgtgacaacaagcaagcaagtgcaaaagaaagtttaccaagtcaaaccagtgatagt
ggtgcaagtactgttgtcgacaatgctgaaggcgattgtgagctaagaacagaggaatct
catcatctaaacccaagtattaagattgtatcaatttgtaatactttcagtaagagcgac
gccgaccggattcgagagatctttaagaggaggagatgcgatagggctgcaaatttgaag
cgaacgaaagttagagatgacgaggtagacagtgaagcctggatagagagagaactggag
atgggaatagaactggaatctgccacttcccggaagcgagggagggtgcactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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