KEGG   Gossypium hirsutum (upland cotton): 107908917
Entry
107908917         CDS       T04793                                 
Name
(RefSeq) pectate lyase-like
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107908917
Enzymes [BR:ghi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     107908917
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 107908917
NCBI-ProteinID: XP_016691701
UniProt: A0A1U8JN56
Position
D02:68755465..68757635
AA seq 454 aa
MEITMLRLVFLFSFFTTIPRLWANIVEFDDFWKQREEEAWKIALASYEPNPENVTNHLNY
KVNKALNKRSSNKIIEFKGVITNDTIRYLRGKHKKYIGPCMATNPIDRCWRCRENWAENR
KRLALCGLGFGRKATGGDEGDYYLVTDNSDDDVLEPKPGTLRHAVIQNKPLWIIFAKDMH
IKLSKELIVQSNKTIDGRGANVHIAHGCGITLQFVHNIIIHNIHIHHVIESQGGLIRDSE
DHYGYRTIGDGDGISIFGSSNIWLDHISMSECQDGLIDVIQGSTAITISNCHFTHHDHVI
LLGASDTYSNDQYMQVTIAFNHFGKELIQRMPRCRWGFFHVVNNDYTHWKMYAIGGSTHP
TIISEGNRYIAPDDPNTKEITNRNYAPESEWKNWVWRSEGDLYMNGAFFRTSGPPSPPNL
NFSEKDVIKAKPATFVRRLTRFAGTLDCKEYVKC
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggagataactatgctaaggcttgtttttctcttttctttttttaccacaattccaagg
ctatgggcaaatattgttgaatttgatgacttttggaagcaacgtgaagaagaagcttgg
aagattgccctagcatcttatgaaccgaacccagaaaatgttactaatcacctgaactac
aaagttaacaaggctcttaataaaagaagttctaacaaaatcattgaatttaagggtgtt
attactaatgacacaataagatacttgaggggtaaacacaagaagtacattggtccatgt
atggcgactaatccgattgataggtgttggcgatgtagagagaactgggctgagaatcgt
aaaagattggcgctatgtgggcttggttttggtcgtaaagctactggtggagatgaagga
gattactatttagtgacagataattctgatgatgatgttttagaacctaaaccaggaact
ttacgtcatgctgtgatccagaataagccgttgtggatcatttttgctaaggatatgcac
atcaaattatcaaaggagctaattgttcaaagcaataagaccattgatggtcgtggagca
aatgttcatatagcacatggatgtggaattacacttcaatttgtgcacaatatcatcatt
cataacattcatattcatcatgttattgaaagtcaaggtggcctaattagggattctgaa
gatcactacggttatcgaacaatcggtgatggagatgggatttctatctttggatcatca
aatatttggcttgatcatatttccatgtctgagtgccaagatggacttattgatgtaata
caaggttccactgccatcaccatttcaaattgccatttcacacatcatgatcatgtgata
ttgttaggagcaagtgacacttattctaatgatcaatacatgcaagtcacaattgcgttc
aaccattttggaaaagaattgatacaaagaatgcctagatgtcgatggggattctttcat
gttgttaacaatgactacactcattggaaaatgtatgccattggtggtagcacgcatcct
actattattagcgaaggcaacaggtatattgccccagatgaccccaataccaaagagata
actaataggaactatgcaccagaatcagaatggaagaattgggtatggagatcagaagga
gacttgtacatgaatggagccttcttcagaacttctgggccaccctcacctcctaatttg
aactttagcgagaaagatgtgatcaaagccaagcctgcaacatttgttagaagactcaca
cgttttgcagggactcttgattgcaaggaatatgtcaagtgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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