KEGG   Gossypium hirsutum (upland cotton): 107909669
Entry
107909669         CDS       T04793                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2 isoform X8
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107909669
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ghi01002]
    107909669
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107909669
   04121 Ubiquitin system [BR:ghi04121]
    107909669
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     107909669
Peptidases and inhibitors [BR:ghi01002]
 Metallo peptidases
  Family M67
   107909669
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Others
   Others
    107909669
Ubiquitin system [BR:ghi04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    107909669
SSDB
Motif
Pfam: JAB Prok-JAB
Other DBs
NCBI-GeneID: 107909669
NCBI-ProteinID: XP_016692773
UniProt: A0A1U8JVH3
Position
D02:complement(61150911..61156110)
AA seq 297 aa
MTDDRFSQMPNNRYSQERICGIPQTECQSLRIVIEERVGLASCNELDFVSSYRGHGSPCP
VPDQATTTCKLFNVHAVTQSSPSTILSFTEKASQTSHVSRVIDSDQQSSNELEASRVLQN
VHISTRLMEDFLELAKENTKKDLETCGVLGAFLEKGTFYVTTLIIPKQESTSNSCQAISD
EEIFAIQNERSLFPVGWIHTHPSQSCFMSSIDLHTQYSYQVMVPEAFAIVVAPTDNSRSY
GIFRVSEPNGMSLLKECQEKGSQFHSHEETVDGSPIYERCTHVYKNSNLRFEIFDLR
NT seq 894 nt   +upstreamnt  +downstreamnt
atgacagacgatagattttctcagatgccaaacaacagatattcacaggagagaatctgt
ggcatacctcaaacagaatgtcaaagcttgaggattgtcattgaggaaagagttggactg
gcatcttgtaatgaactggattttgtgagtagctacagaggacatggatcaccttgtccg
gttccagatcaggcaaccaccacatgcaagctcttcaatgttcatgctgtcactcaatct
tccccttctacgatactctctttcaccgagaaagcatctcaaacttctcatgtttcacgt
gtaattgattcagaccaacagtcatccaatgaactggaagcttctagggtgcttcagaat
gttcatatatcaacacgactaatggaggattttcttgaactagctaaggaaaacacaaaa
aaggatctggaaacctgtggtgttcttggtgcttttcttgaaaagggaactttctatgta
accactctgataatacctaaacaggaatcaacttcaaattcttgtcaagctattagtgac
gaggaaatttttgccatacaaaatgaacggtccctttttccagtgggatggatacataca
cacccttctcagagttgtttcatgtcatcaatagatctccatactcaatactcgtatcag
gtaatggtgcccgaggcttttgccatcgttgtggctcctaccgataattcaaggagttat
ggaatattccgagtatctgaacccaatggaatgagtctcctgaaagaatgccaagagaaa
ggatctcaatttcattctcacgaagaaacagtagatgggagccccatatatgaacgctgc
actcatgtctacaaaaattcaaatctaaggtttgaaatctttgacctgcgctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (12)   
   RefSeq(nuc) (10)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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