KEGG   Gossypium hirsutum (upland cotton): 107910594
Entry
107910594         CDS       T04793                                 
Name
(RefSeq) WD repeat-containing protein LWD1
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107910594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107910594
   03036 Chromosome and associated proteins [BR:ghi03036]
    107910594
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107910594
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     107910594
SSDB
Motif
Pfam: WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 107910594
NCBI-ProteinID: XP_016693970
UniProt: Q8LJS9
Position
D02:37270894..37272220
AA seq 346 aa
MTATSDPNPEVSDEQQKRSEIYTYEAPWYIYAMNWSVRRDKKYRLAIASLLEQYPNRLQI
VQLDDSNGEIRSDPNLSFDHPYPATKTIFIPDKDCQKPDLLATSSDFLRIWRISDDGSRV
DLKSLLNGNKNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIEKETVDTQLIAHDKE
VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDAPLVRLGWNKQDPRYMAT
IIMDSAKVVVLDIRFPTLPVVELRRHQASVNAVAWAPHSSCHICTAGDDSQALIWDLSSM
GQPVKGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgacggccaccagcgatccgaaccccgaagtttccgacgagcagcaaaaacgatcggag
atatacacatatgaagctccctggtacatctacgctatgaattggagcgtccgccgcgac
aaaaagtaccgactcgccatcgccagcctcctcgagcaataccctaaccgtctccagatt
gttcaactcgacgactccaatggtgagatccggtcggatcccaacctctccttcgaccat
ccctatcccgctactaagaccatcttcattcccgacaaggattgccagaaacccgatctt
ctcgctacctcctccgattttcttcgcatatggcggatctcggatgacggttcccgcgtt
gacctcaaatcgctccttaatggcaataagaacagtgaattttgcggtcctctcacgtct
ttcgactggaacgaggcggagccgaagcgaatcgggacttcctccattgatacgacttgc
actatttgggatatcgagaaggaaacagtggatacccagttaattgcccacgataaggag
gtttacgacatcgcttggggtggagttggggttttcgcttccgtctccgccgacggttcc
gttagggttttcgatttacgcgacaaggaacattcgacgatcatctacgagagttcggag
ccggacgcgccgctggtgcggttggggtggaacaagcaggaccccagatatatggcgacc
attataatggatagtgccaaggtggttgttttggatatccgtttcccgacgttgccggtg
gttgagttgcggagacaccaggcgagcgtcaatgccgtcgcttgggctccccatagttcc
tgccacatttgcaccgccggcgatgattctcaggcgttgatttgggatttgtcttcgatg
ggtcagcctgttaaaggtgggcttgaccccattcttgcatacacggctggggctgaaatt
gaacagttgcaatggtcgtcgtctcagcctgattgggtggccattgccttctccactaag
cttcagattctaagggtatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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