KEGG   Gossypium hirsutum (upland cotton): 107912426
Entry
107912426         CDS       T04793                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107912426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107912426
   03032 DNA replication proteins [BR:ghi03032]
    107912426
Spliceosome [BR:ghi03041]
 Complex A
  U1 snRNP components
   Sm proteins
    107912426
  U2 snRNP components
    107912426
 Complex B
  U1 snRNP components
    107912426
  U4/U6.U5 tri-snRNP components
    107912426
 Complex C
  U2 snRNP components
    107912426
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     107912426
SSDB
Motif
Pfam: LSM Gemin7
Other DBs
NCBI-GeneID: 107912426
NCBI-ProteinID: XP_016696096
UniProt: A0A1U8K0N0
Position
D11:12195768..12198339
AA seq 114 aa
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVSLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRGRGRGRGR
NT seq 345 nt   +upstreamnt  +downstreamnt
atgaagctcgtcaggtttttgatgaagttgaacaatgaaacggtgtcgattgagctcaag
aacggaaccgtcgttcacggcaccatcacaggcgtggatatcagcatgaacacccatctg
aaaacagtgaaacttacattgaaggggaaaaatccagtgagtttggatcacctcagtgtg
aggggtaataatattcgctattatatcctgcctgacagcttaaatcttgagacattgctg
gttgaagagacaccaagggtgaagcccaagaagccaacagctggcaggcctttgggacgt
ggtcggggtcgtgggcgtggacgtggacgtggtcgaggccgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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