KEGG   Gossypium hirsutum (upland cotton): 107913072
Entry
107913072         CDS       T04793                                 
Name
(RefSeq) nucleolar protein 6-like isoform X1
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107913072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ghi03009]
    107913072
Ribosome biogenesis [BR:ghi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    107913072
SSDB
Motif
Pfam: Nrap_D5 Nrap_D4 Nrap_D3 Nrap Nrap_D2 Nrap_D6
Other DBs
NCBI-GeneID: 107913072
NCBI-ProteinID: XP_016697003
UniProt: A0A1U8K7Q7
Position
D11:22311811..22318860
AA seq 1046 aa
METETCIDSMDFKVQELLKEARLECSSLLTKLVDDTVSAIKSAIDKIPEGLQVTADWAPG
FVRDIGADKAEFKFKKPKSIEIGGSYSIGCIAKPDVNIDLLLRLPKECFHEKDYLNYRYH
AKRCLYLCVIKKHLKSSSSIQKVEWSALQNEARKPVLVVYPAANLGEVPGLFIRIIPTAT
SLFDLSKLNMKRNNVRALNAGDDPQPTPIYNCSILEDMYLEEKSNFIKKTFSGWKELGEA
LILLKVWARLRSSIYVHDCLNGFLISIIVSYLVAKNKINRDMMPMGIFRATLKFIETQPL
WKHGLYFPMSDQNVSSKGNEQLNSLTRFNLAFRISSVAYPELQDEVALTLRCLEKCRDGG
FEEIFTTKIDNAAKYDYCIRLNLKGNSEVYSLGFCLDEECWRVYEQDVHSLLNQGLTDRA
KFIRVIWRNTYSDFNVENGLSALDSEPLFVGISVSSVEKAFRVVDIGPNAEKKDEALMFR
KFWGEKAELRRFQDGKIAESTVWESKQGTRHLILKRIIEFLLGRHLSLSKKDIVPVVDQL
DFCLLHDGKDPVSHSAKLLGTFEELSKRLRSIEDVPLKISSVQPLDSAFRFTSVFPPEPH
PLASKKVDVARLHNLTPFCVQSLEVMIQLEGSGNWPMDDVLIEKTKSVFLLKIAESLQDN
WGITCTVTEEDVDVFMDGYAFRLRILHERGLSLVNKEIGGDQMKRVSSADKMLFVRSQHA
SMINGLQFRYPIFGPVVRLAKRWLASHLFSACLAEEAAELLVAYLFLKPLPFNVPCSRIT
GFLRFLRLLAEHDWAFSPLVVDINGDLSQNDEKEIDDNFTQSRKAYEENTQNESKAMFLA
TAYDKASEAWTRCSPNPLELKRLAAYARSSASLLTKLILQNQTDSRGWEVHYTCLLRTPL
SLYDAVILLHGDRLPYPKRLLFTSELDQGRHVAHGNASTCFHPFLLPSDMKGSSLEQLKT
KLMVNFDPLRCFVGDVEKGFSNRLKLWYDSLGGDAIGLTWERSKKREREEEETDGKYPVD
LLRNIGELGKGFVRDVYLLKAPRLSS
NT seq 3141 nt   +upstreamnt  +downstreamnt
atggagactgaaacttgcattgactctatggacttcaaagttcaagagttattaaaggag
gctcgtctcgaatgttcgtctctacttaccaagctcgtcgacgacaccgtttccgccatc
aaatccgccatagataaaattcctgaaggccttcaggttaccgcggattgggctccaggt
tttgtgagagatattggtgcagacaaagccgaatttaaatttaagaagccgaagtctatt
gaaattggtggtagttattcaataggctgcatagcaaaaccagatgttaatatcgatctt
ctcctccgcttaccaaaggaatgtttccacgagaaagactacctaaattaccggtatcat
gctaaaaggtgcctttacctctgtgttataaagaagcacttgaaatcctcttcatcaatt
cagaaggttgaatggtctgctttgcaaaacgaggctaggaaacctgtattggttgtctat
ccagctgcaaaccttggtgaagttcctgggctttttataagaataattcccacagcaaca
tccctatttgatctttccaagttgaacatgaagcggaacaatgtacgagctctgaatgca
ggggatgatcctcagcctacaccaatatataattgtagcatattggaagacatgtattta
gaggagaagtcaaattttattaagaaaacattttctggatggaaggaattgggagaggcc
ttaatcttgctgaaggtctgggctcggttgagaagttcgatatatgttcatgattgctta
aatgggtttctaatatctattatagtgtcgtaccttgtggccaaaaataagattaaccgt
gatatgatgccaatggggatatttcgtgccacattgaaatttattgaaactcaaccattg
tggaagcatggactttactttccaatgtcagaccagaatgtttcttctaagggaaatgag
cagcttaattctttaacccgcttcaatttggcattcagaatatcaagtgttgcttatcct
gagctacaagatgaagttgcgttaacacttaggtgtttagaaaaatgcagagatggtgga
tttgaggaaattttcacaaccaagattgacaatgctgctaaatacgattattgcattaga
ttgaacttgaaaggaaatagtgaggtttattctctgggattttgcttggatgaggaatgt
tggagagtgtatgagcaggatgtacacagtctgcttaatcaaggattgactgatagagca
aagtttattcgtgttatttggaggaacacttattcggactttaatgttgaaaatggctta
tcagcacttgatagtgagccattatttgttggaatttcagtgagctctgtagagaaggct
tttagggttgtagatattggcccaaatgctgaaaagaaagacgaggctctcatgtttcga
aaattttggggtgagaaggctgagcttcggagatttcaagatggtaaaattgcagaaagc
acagtatgggagagcaagcaggggacaagacatctcattttaaaaagaattattgagttt
ttactgggacgccatctttctttatcgaaaaaggatattgtcccagtagtggatcagctt
gatttctgtttgctacatgatggtaaagacccggtatcacattctgcaaaactgcttgga
acttttgaagaattgtctaaacgattgcgttctattgaagatgttcccttgaagatatct
agtgtgcagcctcttgattctgccttcaggtttacttctgtatttcctcctgaacctcat
cctctggcaagtaaaaaggtggatgtggcaaggttacataatttgaccccattctgtgtt
cagtcacttgaagttatgattcagttggaaggttctgggaattggccaatggatgatgtc
ttaattgagaaaactaaatcagttttccttctgaaaattgcagaaagtcttcaggataac
tgggggataacatgtactgttactgaggaagatgtggatgttttcatggatggatatgca
tttcgtcttagaattttgcatgagagaggcctaagcctggtgaataaagaaattggaggt
gaccaaatgaagcgggtttcatctgctgataaaatgctttttgttcgtagtcaacatgca
agcatgataaatggattacagtttcgttacccgatatttgggccggttgttaggcttgca
aaacggtggcttgcttcacatctcttttcagcttgcttggcagaagaggctgctgagcta
ttagttgcctacctctttttgaagcctctaccatttaatgttccctgttcgcggatcact
ggatttttaaggttcttgcgactactagctgaacatgattgggctttttctccattggtt
gttgatataaatggtgatctgagccaaaatgatgagaaagagattgatgataactttacg
caaagtagaaaagcttatgaagaaaacacccaaaacgaaagcaaggccatgttcctggct
actgcttatgacaaggcatctgaagcttggactagatgctcaccaaatccattggagctc
aaaaggttggcggcttatgctcgaagcagtgcaagcttgttgacaaaactcatattgcaa
aatcagactgattcccgtggatgggaggtgcattatacatgccttctccgaactccactg
agcctctatgatgctgtaatacttctccatggagatagattaccttacccaaaacgtctc
ctcttcacatctgaactggaccaagggcggcatgtggctcatggcaatgctagcacttgt
ttccaccccttcctattgccttctgatatgaagggtagtagcttagagcaacttaaaacc
aagctaatggtaaactttgatccactaaggtgctttgttggagatgtagagaaagggttc
tccaacagattgaagttatggtatgattcattaggaggtgatgctatcggtctaacatgg
gaacggtcaaagaaacgagaacgagaagaggaagagacggacggaaaatatccggttgat
ttgttgagaaatataggtgaactggggaaaggatttgtgagagatgtttatctgctcaag
gctcccaggctttcgagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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