KEGG   Gossypium hirsutum (upland cotton): 107913303
Entry
107913303         CDS       T04793                                 
Name
(RefSeq) ruvB-like 2
  KO
K11338  RuvB-like protein 2 [EC:5.6.2.3]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107913303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    107913303
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ghi03037]
    107913303
Enzymes [BR:ghi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     107913303
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     107913303
  Chromatin remodeling factors
   SRCAP complex
    107913303
   INO80 complex
    107913303
   INO80 complex (yeast)
    107913303
   SWR1 complex
    107913303
   ASTRA complex
    107913303
Cilium and associated proteins [BR:ghi03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   107913303
SSDB
Motif
Pfam: TIP49 TIP49_C AAA DnaB_C RuvB_N AAA_22 AAA_19 AAA_5 AAA_16 Mg_chelatase AAA_25 ATPase Zeta_toxin TsaE AAA_17 nSTAND3 bpMoxR SLFN-g3_helicase AAA_7 AAA_18
Other DBs
NCBI-GeneID: 107913303
NCBI-ProteinID: XP_040959945
Position
D11:complement(28833778..28837860)
AA seq 465 aa
MAELKLSESRDLTRIERIGAHSHIRGLGLDSSLEPRDVSEGMVGQAEARKAAGVILQMIK
DGKIAGRAILLAGQPGTGKTAIAMGMAKSLGLETPFSMLSGSEIFSLEMSKTEALMQAFR
KSIGVRIKEETEIIEGEVVEIQIDRPAVSGAASKTGKLTLKTTDMETVYDLGAKMIEALG
KEKVQSGDVIAIDKASGKITKLGRSFSRSRDYDAMGPQTKFVQCPDGELQKRKEVVHCVT
LHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHM
LDIECFSFLNRALENEMAPILVVATNRGITSIRGTNYKSPHGIPIDLLDRLLIITTQPYS
EDEIRKILDIRCQEEDVEMSEDAKQLLTKIGHETSLRYAIHLITASALNCQKRKGMVVEV
QDITRVYSLFLDVRRSTQYLMEYQKEYMFNEASIIDGGDADSMHD
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggcggagctgaaactctcggagagccgagacctgacccgaatcgaacgcattggggct
cattcccacatacggggcctaggcctcgactcctctctggagccccgtgacgtctcggaa
gggatggtgggccaagcagaagctcgtaaagccgccggtgtcatcctccaaatgatcaaa
gacggtaaaattgctggccgtgctatcttattagcgggccaacccggaaccggaaaaacc
gccatcgccatgggcatggcgaaatcccttggccttgaaacccctttctctatgctctct
ggcagcgaaatcttctcccttgagatgtcgaaaaccgaagctttaatgcaagcgtttcga
aagtccatcggggtaagaatcaaggaagaaactgaaataatcgaaggcgaagtcgttgaa
atccagattgaccggccggcagtttctggggcggcttcaaaaactggaaaattaacgctt
aaaacgacggacatggagaccgtttacgatttaggggcgaagatgatcgaggcattaggg
aaagagaaagtgcagagtggagatgtgatagctattgataaagcttcagggaaaataacg
aagcttggaaggtcattttcaaggtcgagggattacgatgctatgggtccgcaaacaaag
ttcgtgcaatgtccagacggagagctgcagaaaagaaaagaagtcgtccattgtgttacg
cttcatgagatcgatgtcattaacagcagaacacagggatttcttgctcttttcactggg
gatactggtgaaatccgtgctgaggtgagagaacaaattgacacgaaggtggcagagtgg
agggaggaagggaaggctgaaatcgtgcctggtgttctctttatcgatgaggtgcacatg
cttgacatcgagtgcttttctttcctgaaccgtgctcttgagaatgagatggccccgata
ttagtagttgctacaaacagaggcataacttcaatccgtggcacaaattacaaatcccct
catggaattccaattgatcttcttgatagactactaatcatcactactcaaccttattcc
gaggatgaaattcgtaagattctagacatcaggtgccaagaggaagatgtagagatgtct
gaagatgcaaaacaactgttgaccaaaattgggcacgagacctccttgagatatgctatc
catctgatcacagcttctgcattgaattgccagaagcggaaggggatggttgtggaagtg
caggacatcactcgtgtttacagtctatttctggatgtaaggagatcaacgcagtacttg
atggagtaccaaaaagaatacatgttcaatgaagcatcaatcattgatggtggggatgcc
gattccatgcacgattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (20)   
   Pfam (20)   
All databases (35)   

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