KEGG   Gossypium hirsutum (upland cotton): 107915561
Entry
107915561         CDS       T04793                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Module
ghi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107915561
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     107915561
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 107915561
NCBI-ProteinID: XP_040933933
Position
A10:107504875..107506579
AA seq 396 aa
MKLSGCNLPGIIVMVFVMLSSSSTSAITNFNVLNFGAIPTGRTDSADSFLKAWNAACGTA
DSTFIYVPKGRYLVGPLAFKGQCKSSQIIIRIDGTIVAPLDYGVLGKSNNWFSFEDVSGV
SIIGRGTFDAKGPSLWACKASNSNSCPSGATTLSFTKSNNIRINGLTSLNSQMFHIVING
CQNVHLEGVKIVAAGNSPNTDGIHVQLSRNVEILSTSIKTGDDCISIGSGTENLWIEQVT
CGPGHGISIGSLAKDLEEEGVQNVTVKKTIFSNTQNGLRIKSWARPSNGYVQGIRFIDSV
MKNVQNPIVIDQNYCPRNENCPGQVSGIKINDIVYEDIRGTSSTPIAIKFDCSVKNPCTE
IKLQNVNLTYLNKTAQSFCSNVVGKAIDLVRPNSCL
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgaagctttctggttgtaatttacctggaattattgtgatggtctttgttatgctaagt
tcaagttcaacatctgcgattacaaactttaatgtcttaaactttggggctatcccgact
ggtagaaccgattcagcggacagtttcctcaaggcatggaatgcagcctgtggcacggca
gactcgaccttcatatatgtgcccaaaggacggtatttggttggtccattggcttttaaa
ggccaatgcaaaagctctcagatcattataagaatcgatggcacaattgtggctcctttg
gattatggagtgctgggaaaatcgaataattggttcagctttgaagatgtgagcggtgtt
tctataattggtcgaggtacatttgatgctaaaggaccttctctttgggcctgcaaagct
tccaactccaactcatgtccttccggggccacgacactgagttttaccaaatccaacaac
atcaggatcaatggattaacgtctttaaatagccaaatgtttcatattgtgatcaatgga
tgccaaaatgtgcacctcgaaggagttaagatcgtcgctgctggtaatagtcccaacact
gatggcatccatgtccaattatcgagaaatgtggaaattttaagcacttccattaaaact
ggagatgattgcatctcgattggttctggcactgaaaatttatggattgaacaagtcact
tgtggtcctggtcatggcatcagcattggaagtttggcaaaggatttggaagaggaagga
gtccaaaatgttacggtcaaaaagacaattttttccaacactcaaaatgggttaaggatc
aaatcatgggctaggcctagtaacggatatgttcaagggatacgatttatagattccgtg
atgaaaaatgttcaaaatcctattgtgattgatcaaaattattgtcctcgcaatgaaaat
tgcccgggtcaggtttcgggaataaagattaatgatatcgtgtatgaagatataagagga
acatcatcgacacccatagctataaaattcgattgtagtgtcaaaaacccgtgcactgaa
ataaaattgcaaaatgtgaatttgacatatttgaacaaaacagctcaatcattttgtagc
aatgtggttggaaaagcaattgatttagttcgaccaaacagttgtttgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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