KEGG   Gossypium hirsutum (upland cotton): 107916351
Entry
107916351         CDS       T04793                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107916351
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ghi01009]
    107916351
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107916351
   03036 Chromosome and associated proteins [BR:ghi03036]
    107916351
Protein phosphatases and associated proteins [BR:ghi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     107916351
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     107916351
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     107916351
SSDB
Motif
Pfam: WD40 ComGF
Other DBs
NCBI-GeneID: 107916351
NCBI-ProteinID: XP_016701100
UniProt: A0A1U8KF39
Position
D10:6406162..6414698
AA seq 507 aa
MNGGDEVVTAPAGPPQPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRGG
RVVLFERTDTKDHDALRRDLERMDHPINRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANGALFLLSTNDKTIKFWKVQEKKVKKISEMNLDPPKAVGNGCVASSSNSNSPT
PGLANGGSPDNDFSFPPGGLPSLRLPVVTSQETNLVARCRRVYAHAHDYHINSISNNSDG
ETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKG
SIRLIDLRQSALCDFHAKLFEEPEAPGSRSFFTEIIASISDIKFAKDGRYMLSRDYMTLK
LWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVF
GCAPGSTEATTLEASKNPVRRQVQMPSRPSRSLSSITRVVRRGAETSGVDANGNSFDFTT
KLLHLAWHPTENSIACAAANSLYMYYA
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgaacggaggagatgaggtggtcacagctccggcaggcccgccacaaccgttggattgg
aaattctctcaggtatttggtgaacgaacggctggagaagaagttcaagaagttgatatt
atttcagcaattgaatttgataaaactggggatcacctggccactggtgaccgtgggggc
cgggttgttctctttgagaggacagataccaaggatcatgatgcactgagaagggatttg
gagagaatggaccacccaattaatcggcaccctgagttccgttacaagacagagttccaa
agccatgagcctgagtttgactatctcaagagcttggaaatagaggaaaaaatcaacaaa
atcagatggtgccaaacagccaatggtgccctatttctcctttctacaaatgataaaacc
atcaagttttggaaggtacaagaaaagaaggtcaaaaaaatttctgaaatgaatttggac
cctccaaaagctgtaggaaatggctgcgtggctagttcaagtaattctaatagtcccaca
cctggtcttgcaaatggaggttcccctgacaatgatttttctttcccaccaggaggcctg
ccatcattgcgtttgcctgtggtaactagtcaggaaaccaacctagtagctagatgtcga
agagtatatgcccatgctcatgattatcacatcaattccatttcaaataacagtgacggc
gaaacttttatatcagctgatgatctgcgtataaatctttggaacttggaaatcagcaat
caaagtttcaatatcgttgatgtaaagcctgcaaacatggaggatctaactgaggttata
acatcggcagagttccaccctacccactgtaatatgttagcgtatagtagttcaaaaggc
tcaattcgtctcattgatttgcggcagtcagctttgtgtgattttcatgccaaattattt
gaagaaccagaggcacctggttctagatcattttttacagagataattgcctcgatctca
gatattaaatttgcaaaggacggaagatatatgcttagccgtgattacatgactcttaag
ctgtgggacatcaatatggattctggtccagtttcaactttccaggttcatgaatatttg
agacctaagctatgtgatttgtacgaaaatgattctatctttgacaaatttgagtgttgc
ctaagtggtgatggattgcgtgtggcaacaggttcctacagcaatctattccgtgtattt
ggttgtgcccctggaagcacagaggcaactactttggaagccagcaaaaatccagtgagg
agacaggttcagatgccctcaaggccctccagatccctaagcagtataacacgtgttgtt
agacgaggggctgaaacctctggagtagatgcaaatggaaattctttcgatttcacaaca
aagttgctgcacctagcatggcacccaaccgaaaactcaatagcctgtgctgctgcaaat
agcttgtacatgtactatgcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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