KEGG   Gossypium hirsutum (upland cotton): 107922011
Entry
107922011         CDS       T04793                                 
Name
(RefSeq) translation initiation factor IF-2, chloroplastic isoform X1
  KO
K02519  translation initiation factor IF-2
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:ghi03012]
    107922011
   03029 Mitochondrial biogenesis [BR:ghi03029]
    107922011
Translation factors [BR:ghi03012]
 Eukaryotic type
  Initiation factors
   MTIFs
    107922011
 Prokaryotic type
   107922011
Mitochondrial biogenesis [BR:ghi03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    107922011
SSDB
Motif
Pfam: GTP_EFTU IF-2 MMR_HSR1 IF2_N Ras GTP_EFTU_D2 RsgA_GTPase Arf MMR_HSR1_Xtn Roc CYTH
Other DBs
NCBI-GeneID: 107922011
NCBI-ProteinID: XP_016707325
UniProt: A0A1U8KY25
Position
D01:complement(12725224..12734183)
AA seq 995 aa
MVIVVGTMPSSSLASLVNLGTLNATFINYFSEPISSSYYSCVRRVSLSKRSFSRKCKCKY
SVAPTDFVAEANNSSSYKDSDAEIVLKPAPKPVLKSEGVKNDKGLSWNAELSEGEDEDKE
ENERNKVIESLGEVLEKAEKLETSNVNVNVNVNKPKASGDGSGSGGGKKAKTLKSVWRKG
DTVGIVQKVVKESPKVNDKKGEGKVESQGESAAAPLRPPQPPVRPQPKLQAKPAVAPPPV
VKKPVILKDVGAGQKLESDTDGKSKERKPILIDKFASKKPVVDPVIAQAVLAPTKPGKGP
APGKFKDDYRKKNVSAGGPRRRIISDDLEIPDEETSELNVSIPGAATSRKGRKWSKARRK
AARIQAAKEAAPVKVEILEVGEKGMSVEEVAYNLAIGEGEILGYLYSKGIKPDGVQTLDK
DMVKMVCKEYEVEVIDADPVKVEQMAKKKEIFDEDDLDKLQDRPPVLTIMGHVDHGKTTL
LDVIRKSKVAASEAGGITQGIGAYKVLVPIDGKPQPCVFLDTPGHEAFGAMRARGARVTD
IVIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELSSVGLMPEV
WGGDIPMVQISALKGQNIDDLLETVMLVAELQELKANPDRNAKGTIIEAGLHKSKGSVAT
FIVQNGTLKRGDVVVCGEAFGKVRALFDDGGNRVDEAGPSIPVQVIGLNNVPLAGDEFEV
VDSLDVAREKAEACAELLRNERMSAKAGDGKVTLSSLASAVSAGKLSGLDLHQLNIILKV
DLQGSIEAVRQALLVLPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNVKTPGPVK
SYAENKGVEIRLYRVIYELIDDVRNAMEGLLEPVEEQVPIGSAEVRAVFSSGSGRVAGCM
VTEGKIVDGCGIRVIRNGRTVHVGVLDSLRRVKEIVKEFFGQVNAGLECGMGVEDYDQWQ
EGDILEAFNMVQKKRTLEEASASMAAALEGVGVEL
NT seq 2988 nt   +upstreamnt  +downstreamnt
atggtaatagttgtaggaacaatgccttcttcttctttagcttcccttgttaatttggga
acccttaatgccactttcattaattatttctctgaacctatttcgtcctcttactattct
tgtgttagaagagtttcgttgtctaaaagaagttttagtaggaaatgtaaatgtaaatac
tctgtggcacccaccgattttgttgctgaggcaaacaattcctcttcttataaagatagt
gatgctgaaattgttcttaaacctgcccccaagccggttttgaagtccgaaggggtgaaa
aacgataagggtttgtcttggaatgctgaattgagtgagggtgaggatgaggataaagaa
gaaaatgagaggaataaagtgattgagtctttaggtgaagtattggagaaagctgaaaag
ctggaaacctctaatgtaaatgttaatgtgaatgtgaataaacccaaagccagtggtgat
ggtagtggttcgggtggtggcaaaaaggctaagactttgaaaagtgtgtggaggaaaggg
gatactgttgggatcgtgcaaaaggttgttaaggagtctcctaaggttaatgataaaaaa
ggagaggggaaggtggagtctcaaggtgaaagtgctgctgcacctttgagacctccccaa
ccacctgtaagacctcaacctaagttacaagctaagccagctgtagcacctccacctgtg
gtgaagaagccggttatcttgaaagatgttggggcaggtcaaaagttagagtctgataca
gatgggaagagtaaagaaagaaagcctattctgattgataaatttgcgtcaaagaagcct
gtggttgaccctgtcattgctcaagctgtattagctcctacaaagccagggaagggccct
gcccctggaaagttcaaggatgattatcggaagaaaaatgtttctgctggaggtcctagg
aggcgcattattagtgacgatcttgaaattcctgatgaggagacatcagagttgaacgtg
tcaatacctggtgctgccacctcaaggaaagggcggaaatggagtaaagctagaaggaag
gcagccagaatccaggctgccaaagaggcagcacctgttaaagtggaaattttggaagtt
ggagaaaaaggcatgtcagtagaggaggtagcatacaatttggctattggtgagggggaa
attcttggatatctgtactccaaggggattaaaccagatggagtgcaaactttggacaaa
gacatggtaaaaatggtgtgtaaggagtatgaggttgaagtcatagatgcagaccctgtt
aaggtagaacaaatggcaaaaaagaaggaaatttttgatgaagatgacctagacaagcta
caagacaggcctcctgttctcactataatgggtcatgttgaccatgggaagacaactctt
ctggatgttatccgcaaaagcaaggtggctgcctcagaagcaggtggtataacacaagga
attggagcatataaagttttagtaccgatagatggcaagccacaaccatgtgtttttctt
gatactcctggacatgaggcttttggggcaatgagagctcgtggagcacgggttactgac
attgtgatcattgtggtggctgctgatgatgggattcgtcctcaaacaaatgaggctata
gctcatgccaaagcagctggagtaccaattgtcattgctataaataagatagataaagat
ggagctaacccagaaagagttatgcaagagctttcttcggttggactaatgccagaagtc
tggggtggtgacatccctatggttcagatcagtgctcttaaagggcagaatatagatgac
ctgttggagactgtaatgctagttgccgagttacaagagttaaaggctaatccagatcga
aatgcaaaaggcacaataattgaggcgggtcttcataaatctaaggggtctgtagctact
tttattgtgcagaatggaacccttaaaagaggggatgtagttgtttgtggagaagccttt
ggaaaggtgcgtgctttatttgatgatggcggaaatcgtgtcgatgaggctggaccctca
atacctgtacaggtcattggtttgaataatgttccacttgctggtgatgaatttgaggtt
gttgattcccttgatgttgcacgtgaaaaggcagaggcatgtgctgagttgttgcgaaat
gaacgtatgtcagccaaggctggggatggcaaggtcacactttcttctttagcttctgcg
gtgtcagctggaaagctttctgggttagacttgcaccagctaaatattatcttgaaggtt
gatttacagggatccatagaggctgtcagacaagcattgctggtgctcccacaagacaat
gtcactttgaagtttcttttggaagcaacaggagatgtaagcaccagcgatgtcgatctt
gcggttgctagcaaagctattattttgggatttaatgtaaagacaccaggtccggttaaa
agctatgcagaaaataaaggtgttgagattcggctttatagagttatctatgaacttatt
gatgatgtgaggaatgcaatggaaggactcctggagcctgttgaggaacaagtaccaatt
ggctctgcagaggttcgggctgttttcagcagtggtagtggtcgtgttgctggatgtatg
gtaacagagggaaagatagtggatggttgtggcatccgtgtcattcgaaatggtcgcaca
gtccatgtcggtgttcttgattcattgcgaagggttaaggaaattgttaaagagtttttt
ggacaggtaaatgctggtttggagtgtggtatgggagtggaagattatgatcaatggcag
gaaggagatattcttgaggccttcaacatggttcaaaagaagcgaacacttgaagaggca
tctgcttcaatggcagccgcactggaaggagtaggagtcgagttgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (26)   

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