KEGG   Gossypium hirsutum (upland cotton): 107922298
Entry
107922298         CDS       T04793                                 
Name
(RefSeq) syntaxin-51
  KO
K08503  syntaxin of plants SYP5
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    107922298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107922298
Membrane trafficking [BR:ghi04131]
 SNARE
  SNAP-25[C] (Qc)
   STX8
    107922298
SSDB
Motif
Pfam: SNARE Syntaxin-6_N RIFIN DUF2721 DUF2976
Other DBs
NCBI-GeneID: 107922298
NCBI-ProteinID: XP_016707760
UniProt: A0A1U8KZ96
Position
D01:complement(11128726..11131281)
AA seq 230 aa
MASSDTWIKEYNEAARIADDINGMISERISLPASGPETQRHASAIRRKITILGTRLDGLQ
SLLSRPTGKPLTDKEMNRRKDMVANLRSKANQMASAFNMSNFANRESLLGPETKQDAMSR
TVGLDNSGLVGLQRQIMKEQDEGLEKLEETVMSTKHIALAVNEELDLHTRLIDDLDEHVD
VTDSRLRRVQKNLAILNKRAKGSCSCMCMLLAVVGIVILVVAIYLLVKYL
NT seq 693 nt   +upstreamnt  +downstreamnt
atggcatcttcagacacgtggataaaagaatataatgaagcggcgcgaattgctgatgat
atcaatggcatgatatctgaaaggatttccttgcctgcgtcgggaccagaaactcagcgt
catgcatccgccataagaaggaagattacgattttagggaccagacttgatggattgcag
tcccttttgtctagacctactgggaaacccttaacagataaggagatgaatcgccgcaaa
gacatggttgcaaatttgagatctaaagcaaatcagatggcttctgcattcaacatgtca
aactttgccaacagagagagcttgctggggccagaaactaagcaagatgccatgagtaga
acagttggtttggataattctggtcttgttggtcttcagcgacaaataatgaaagagcaa
gatgagggtcttgagaagttggaagagacagtaatgagtacaaagcatattgcattggcg
gtcaatgaagaacttgatctgcacaccagactcattgatgacctggacgaacatgtggat
gttactgattctcgcctccggagagtgcagaaaaacctggcaattttgaacaagcgcgcc
aagggcagttgttcctgtatgtgcatgcttttggctgttgtcggaatcgtgattctggtt
gtggccatatacctacttgttaaatatttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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