KEGG   Gossypium hirsutum (upland cotton): 107927312
Entry
107927312         CDS       T04793                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 10 isoform X1
  KO
K14777  ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ghi03009]
    107927312
Ribosome biogenesis [BR:ghi03009]
 Eukaryotic type
  90S particles
   Helicases
    107927312
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1
Other DBs
NCBI-GeneID: 107927312
NCBI-ProteinID: XP_016713869
UniProt: A0A1U8LL19
Position
D11:complement(62194560..62200539)
AA seq 444 aa
MAEEEKEEIKSFKDLGLCDELVEACDSLGWNTPTKIQVEAIPHALGGKDLIGLAQTGSGK
TGAFALPILHALLESHSKQGYKSAPVFFALVLSPTRELAIQIAEQFEALGSGINLKCAVL
VGGVDIMQQQIALGKRPHIIVGTPGRLVDHLTNTKGFSLRMLKYLVLDEADRLLNEDFEK
ALDDILNVIPRDRHTYLFSATMTKKVKKLQRACLRNPVKIEAASKYSTVDTLKQQYRFIP
AKYKDCYLVCILTEMSGCTSMVFTRTCDATRLLAFILRNLNIRAIPISGQMTQAKRLGAL
NKFKSGECNVLVCTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL
VNQYELEWYLQIEKLIGKKLPEYPAQEEEVLQYLESVTEAKRLSQMKLKEIGGTKKRRGG
DDEDEDIERYLGVKGKSSKKVKRK
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggctgaggaagagaaggaagagataaagtcgttcaaagatttaggtttatgcgacgaa
ttagtggaagcctgcgacagtttaggttggaacactcctaccaaaatccaagtagaagcc
attccacacgctctcggagggaaggatttgattgggcttgcccaaacaggttctggtaaa
acaggggcgtttgctcttcccatactgcatgcacttttggaaagccattcgaaacaagga
tataaatcagcgcctgtgttttttgctttggtgctttccccaacacgggagcttgcaatc
caaattgctgaacagtttgaagctttaggatctgggattaacctaaaatgtgccgtgctt
gttggaggggtggacataatgcaacaacaaattgcccttgggaagcggccacacattatt
gttggaactcctggacgccttgtggatcacctaaccaatactaaaggtttttctcttcgc
atgctaaaatatttggtcctagatgaggcagataggttgctgaatgaggattttgagaaa
gcacttgacgatattttgaatgttattcctcgggataggcacacgtatttgttttctgca
accatgaccaaaaaggtgaagaagctgcaaagggcatgtctgagaaatcctgtgaagatt
gaagctgcctcaaaatattctactgttgacacattgaagcagcaatacaggtttatacct
gcgaagtacaaggattgctatcttgtttgtattttgactgagatgtctggttgtacatct
atggttttcactcgaacttgtgatgcaactcgccttttggcttttattcttcggaatctt
aatataagggccattccgattagtggtcaaatgactcaggcaaagaggctaggagccttg
aataagttcaagtctggggagtgtaatgttcttgtctgcactgacgttgctagtagagga
cttgacattccatctgtcgatatggttattaattatgatatccctacaaactctaaggat
tacatccatcgagtgggtagaacagctcgtgctggaagatctggtgttgctatctcacta
gtcaatcagtatgagctggagtggtatcttcagatagaaaagcttattggcaaaaagtta
cccgagtatcctgctcaagaagaggaagtcttgcaatacttagaaagtgtcacagaagcc
aagagactatcacagatgaaacttaaagaaattggaggcacaaaaaagaggaggggcgga
gatgatgaggatgaggacatagagagatatctaggcgtcaaaggcaagtcctccaagaaa
gttaagagaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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