KEGG   Gossypium hirsutum (upland cotton): 107927580
Entry
107927580         CDS       T04793                                 
Name
(RefSeq) glutamate--tRNA ligase, cytoplasmic
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00860  Porphyrin metabolism
ghi00970  Aminoacyl-tRNA biosynthesis
ghi01100  Metabolic pathways
ghi01110  Biosynthesis of secondary metabolites
ghi01240  Biosynthesis of cofactors
Module
ghi_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    107927580
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    107927580
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ghi01007]
    107927580
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ghi03016]
    107927580
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ghi02048]
    107927580
Enzymes [BR:ghi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     107927580
Amino acid related enzymes [BR:ghi01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   107927580
Transfer RNA biogenesis [BR:ghi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    107927580
 Prokaryotic type
   Other AARSs
    107927580
Prokaryotic defense system [BR:ghi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    107927580
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2 GST_C tRNA-synt_1e GST_C_3 GST_C_2 LepB_GAP_N
Other DBs
NCBI-GeneID: 107927580
NCBI-ProteinID: XP_040947624
Position
D04:complement(3187654..3191739)
AA seq 727 aa
MEEERIKVLSFPSDSPPLSIIAAAKIAGIALPTQTSTSGSLTLSFSNGLELHGNYVILRY
IGRVAAIRNFYGDDAFHAAQIDEWLEYAPTLLLGSEFENACSYMDIYMEKRTFFVSHSFS
IADIAIWSGLAGAGQRWESLRKSSKYRNLVRWYNSVSAEYSDALNEVTALYVGKKGLGKQ
VAAKPKEQKSADGNSSDKVNLGSRPSSEIDLPYAELGKVRLRFAPEPSGYLHIGHSKAAL
LNQYFAQRYQGEVILRFDDTNPTKESNEFVENLIKDVETLGIKYQKITYTSDYFPKLMDM
AEKLIKEGKAYVDDTPREQMQKERMDGIESKCRSNSVEENLKLWKEMIAGSERGLQCCLR
GKLDMQDPNKSLRDPVYYRCNPVPHHRIGAKYKLYPTYDFACPFVDAEEGITHALRSSEY
HDRNAQYYRIQEDMGMRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQ
GIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERKVLLT
LTDGPDEPFVRIIPRHKKYDGAGEKATTFTKRIWIDYADAEYISVNEEVTLMDWGNAIVK
EIIKDQDGNITQLVGVLHLQGSVKTTKLKLTWLAETSELVNLSLVEFDYLITKKKLEEGE
DFLDALNPCTKKETAAIGDSNIRNLKQGEILQLERKGYFRCDVPFVRPSKPVVLIAIPDG
RQQSMLK
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggaggaagaaaggataaaggtattatcatttccatcggatagccctccactctccatc
attgccgccgcaaagattgcgggaattgctttaccgactcagacttcaacatctggatct
ctcactttgtctttctcaaatgggcttgaattgcatggaaattacgtaattctccgttac
attggtcgagttgctgccattcgtaatttctatggtgatgatgctttccatgctgcccaa
attgatgagtggctggagtatgctcctacccttttattgggttctgagtttgagaatgct
tgtagttacatggacatttatatggagaaacgcacatttttcgtttctcattctttctcc
attgctgacatagctatctggtctggtcttgctggagctggtcaaagatgggaaagcttg
aggaagtcaagcaagtaccgaaaccttgttcgctggtacaattctgtttctgcagaatac
agcgatgccttgaatgaagttactgcattgtatgttggcaaaaaaggattgggaaagcag
gtggcagctaaaccaaaagagcaaaagagtgctgatggaaatagttctgataaggtgaac
ttaggtagcaggccctcatctgaaatagatcttccttatgctgaattgggaaaggtgcga
ttgagatttgctcctgaacctagtggttatctccatatagggcactctaaagcagcctta
ttaaatcaatactttgctcaacggtaccaaggtgaagtaattttgcgctttgatgatacc
aatcccaccaaagaaagcaatgaatttgtagaaaatcttataaaagatgttgagacattg
ggcatcaagtatcaaaagatcacctatacttccgattacttccctaagttaatggatatg
gctgaaaagttgataaaggaggggaaagcctatgtggatgatacgccacgtgagcaaatg
cagaaagaaaggatggatggcattgaatcaaaatgtaggagcaacagtgttgaggagaat
ttaaagttatggaaggaaatgattgctggctctgaaagaggtttgcagtgctgtcttcgt
gggaagctggacatgcaagacccaaacaaatctctcagggatccagtttactaccgctgc
aatcctgttccccaccatcgaattggagccaagtacaagttgtatccaacatatgatttt
gcttgtccatttgttgatgctgaagaaggtataacacatgcactacgatctagtgagtat
catgatcgcaatgctcagtactataggattcaagaggatatgggaatgcggaaggtacac
atatacgagtttagtcgattgaatatggtctacacacttctcagtaagcgtaagcttctc
tggtttgtgcaaaacggtaaagtagatggatgggatgatccccgtttcccaactgttcaa
ggaattgttcgtcgaggtctgaaaatagaagccttgatacaatttattttggaacagggg
gcatcaaaaaatctcaacctgatggaatgggacaaactctggacaattaataagaagatc
atcgatcctgtttgtcctaggcatacagcagtaattgaagaacgaaaggtactattgacc
ttaactgatggtcctgatgagccatttgttcgtattatcccaaggcataagaaatatgat
ggtgctggagagaaagcaaccacttttactaagaggatatggatagactatgctgatgca
gagtacatctcagtgaatgaggaggtaacattaatggattggggaaatgccatcgtgaaa
gaaataatcaaggatcaggatggaaacataactcagttggtaggtgttttgcatcttcaa
ggatctgtcaagacaacaaaattgaagctcacgtggcttgcagaaactagtgaacttgta
aacctttccttggtggagtttgattatctaataacaaagaagaagctggaagaaggggag
gatttcctagatgcactaaacccatgtacgaaaaaggagacagcagcaattggagattcc
aacatccgcaatttgaaacaaggagagatattgcagctggagaggaaaggctacttcaga
tgtgatgttccctttgttagaccttcgaaaccagtggtgttgatcgcaattccagatggg
cggcaacaaagcatgttgaagtag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (38)   

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