KEGG   Gossypium hirsutum (upland cotton): 107927581
Entry
107927581         CDS       T04793                                 
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107927581
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107927581
Enzymes [BR:ghi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     107927581
DNA replication proteins [BR:ghi03032]
 Prokaryotic type
  DNA Topoisomerases
   107927581
DNA repair and recombination proteins [BR:ghi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      107927581
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-GeneID: 107927581
NCBI-ProteinID: XP_016714163
UniProt: A0A1U8LL26
Position
D04:2839548..2863056
AA seq 961 aa
MNSLSSSPTPSISPSMSLSATLRVSSFLRHNLFLAPSRASALRRNVSHLRFLSSSPSRRT
VHHPVKARRGGGQEDDGGLGNGSLTAVVKDGTGDGRDGRVLPFELHKEAMDSYMAYALSV
LLGRALPDVRDGLKPVHRRILYAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDS
MVRMAQDFSLRFPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAILLADLEQDTVDFVP
NFDSSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCALIHNPEASLQE
LLEYMPGPDFPTGGLIMGNLGILAAYRTGRGRIVVRGKADIELLDSKTKRSAVIIKEIPY
QTNKSSLVEKIAELVENKTLEGINDIRDESDRSGMRVVIELKRGADPSIVLNNLYRLTAL
QSSFNCNMVGILDGQPKQMGLKELLQAFLEFRCSVVERRARYKLSQAQDRRHIVEGIVVG
LDNLDRVIDIIKEAKGNAAASAGLKEEFNLSDKQAEAVLDINLRRLNLLERKKFVDESAS
LMEQISKLTELLSSRKNILQLIEQEALELKNKFSSPRRSILDDSDGGQLEDIDVIPNEEM
LLAFSEKGYVKRMKPSTFNLQNRGTIGKSVGKLRVNDAMSDFIVCRSHDHVLYFSDRGIV
YSAYAYKIPESSRTAAGTPLIQIISLSEGERITSIVPVTEFAEDQFLVMLTVNGYIKKVS
LNYFSAIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCDIIRALSRNTR
GAIAMRLKEGDKMASMDIIPAPRHTDLDKAAEDSISYDKGGSGPWLLFVSENGYGKRVPL
SSFKKSPLNRVGLIGYKFSSEDRLAAVFVVGFSLTEDGESDEQVVLVSQSGTVNRIKVRD
ISIQSRYARGVILMRLEHAGKIQSASLISASAEEAAELLPGMQSEEATTNAGTAEGISMS
S
NT seq 2886 nt   +upstreamnt  +downstreamnt
atgaattccttatcttcttctcccactccctcaatctcaccttcaatgtctctctccgct
acactccgcgtctcttctttcctacgccacaatctcttcctcgccccttctcgcgcctcc
gccctccgtcgtaatgtctcccacctccgtttcctctcatcgtccccttctcgtcgtacc
gtacaccatcccgtcaaagcaaggcgcggcggggggcaggaggacgacggtggactagga
aatggaagcttgacggccgttgtcaaagatggaaccggcgatggccgagatgggcgggtt
cttcccttcgagcttcacaaggaggctatggactcatatatggcttatgcattatccgtg
ttgcttggacgggctttgcccgatgttagagatggtttgaagccggtgcataggagaatc
ctatacgcaatgcatgaattaggtctttcgtctagaaaaccgttcaagaaatgtgctaga
gttgttggtgaggtcctcggtaagtttcatcctcatggggataatgcagtatatgattcc
atggtgcggatggcacaggatttttcattgaggttccctcttatccaaggacatggaaat
tttggttcaattgatgctgatcctcctgctgccatgcgttacactgagtgcagacttgaa
gcactcacagaagcaattcttctggcagatctggaacaagatacggttgattttgttcca
aactttgatagttcacaaaaagaaccatcacttctgcctgctagactaccaacattgttg
ctgaatggttcctctgggattgcggttggcatggcaactaacattcctcctcacaatctc
ggagagttggtagatgtgctctgtgcattaattcataatccagaggcctcattgcaagag
ttgttggaatacatgcccggacctgactttccaactggagggctgataatgggaaacctt
gggatcttggcagcatatcgaactgggcgagggcgtattgtagttagaggaaaggctgac
attgaactgcttgactctaagaccaagagaagtgcagttattattaaagagattccttat
cagacaaacaaatcctcgcttgttgagaagattgctgaacttgttgagaataagactcta
gagggtatcaatgatattcgtgatgagagtgatcgctctggaatgcgtgtggtcattgag
cttaaacggggagctgacccatctattgtgctgaataacctttaccgtctcactgctctt
cagtctagttttaactgcaatatggtgggtattcttgatggacagccaaagcagatgggc
ctgaaagagttgcttcaggcatttttagaatttagatgctctgttgttgagagacgtgca
aggtacaagctttcacaagcacaagatagaaggcatattgtagagggtattgtggtaggg
cttgataatttggatagagtaattgatataatcaaagaggctaagggcaatgcagctgca
tcagctggcctgaaggaggaattcaatctttctgacaaacaagctgaggccgtattggat
ataaacttaagacgacttaaccttcttgagcggaaaaagtttgttgatgaaagtgcatca
ttgatggaacaaatttcaaagctaacagaactgttgtcaagccgaaaaaatatattgcag
ctaatagaacaagaagcacttgagctaaagaacaagttttcgagtccaagacgttcaata
ctggatgattcagatggtggccaacttgaagacatagatgttattccaaatgaagaaatg
ctgctggcattcagcgaaaaaggttatgttaaacggatgaagccgagcacttttaatctt
caaaatcgtggaacaattggtaaatctgttggaaaacttcgtgtaaatgatgcaatgtct
gacttcatagtttgccgttcacatgaccatgtgctgtatttcagtgataggggaatagtg
tactcagcttatgcatataaaattccagaaagtagccgaactgctgctgggacgcccctg
atccagatcatatctttatctgaaggcgagagaataacgtcgattgttcctgtcactgag
tttgcggaagaccagtttctagtgatgcttacagtgaatggctacatcaagaaagtatcc
ctgaattacttctcagctattcggtccactggaatcatagccattcaattggttcctggt
gatgagttaaagtgggttcgttgttgcacaaatgatgaccttgtggccatggcttcacaa
aatggaatggtcattctaagttcctgtgacattatccgagcactaagcagaaacaccaga
ggagctattgccatgagactgaaagaaggagataagatggcaagcatggacatcatacca
gctccaaggcatacagatttggataaggcagcagaagattccattagctatgataagggt
ggcagtggtccgtggctcctgtttgtctctgagaatggctatggaaagcgagttccgttg
agtagcttcaaaaagtcgcctttgaacagagttggtttaataggatacaagttctcttca
gaggatcgcttggcagctgtctttgtcgttggcttttcattgacagaagatggtgaaagt
gacgagcaagtggtgcttgtcagccaaagtggtactgttaatagaattaaagttcgggat
atctcaatacagtctcgttatgcaaggggggttattctaatgagactagagcatgccgga
aagattcaatcagcatcactaatctcagcctcagcagaagaagcagcagagttgctaccc
ggtatgcagtcagaagaagcaacaactaatgcaggaacagctgagggcatatctatgtca
tcataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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