KEGG   Gossypium hirsutum (upland cotton): 107929486
Entry
107929486         CDS       T04793                                 
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
  KO
K03093  RNA polymerase sigma-I factor
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107929486
Transcription machinery [BR:ghi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     107929486
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r4 Sigma70_r2 GerE DUF6697
Other DBs
NCBI-GeneID: 107929486
NCBI-ProteinID: XP_016716409
UniProt: A0A1U8LP99
Position
A12:complement(106919994..106923274)
AA seq 516 aa
MGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIMAFKADKFNNTALVTLRDHNLLPVETA
KEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQTFDEKGSE
GETKGRHLRGKRSTESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSGQ
SKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMKALLEA
KENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFQD
FANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG
LESVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVVSLHLRHSVTQ
EEFISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
SGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgggagttgtcagtgtttctagttcagctgcccgaactccagtaggattaggcacaaag
ttttctactcaaagatgtacatttagaagaccttgtattatggcatttaaagcagacaaa
tttaataatacggctctagttacgcttcgagaccataatcttttgccggtggaaacggct
aaggagcacccgaagagacgcgggaaagcgaaaaaggcttccaagactgtaaaccgtgac
tttactgatgaaggttctccgtacaccgtggacgtagattacaacgaagccgctgccaaa
ctcgaaaacatttataagcttagcccttcgactcaaacatttgatgaaaaagggagtgaa
ggtgagacaaaaggacgccatctgagggggaagagatctacagaaagtgatgggaaagcg
gataacggtgatgataagatcgtggttcggagccagactaagaagaacagaagattgggc
cttgataaaaggattgaactgaaaaagaatagagaagaaaagtcggttgtttctggccag
agtaaaaagggtatctcgaatgaaagtgagaagatcgataggcttgtccgggactattcg
gcttcaaccgatttggtcagcctggactggaagaaaatgaagatacctccggttctgccg
tccaccgaacatacttggttgtttaagctaatgcagccaatgaaggcactgcttgaggca
aaagagaacttgcaaaaggatctgggtagagatcctactgaagatgaattagctgaggca
acaaattcgagtgcagctcaagtgagaagacagttagaggttggtcgagctgctagaaat
aagctcattaagcacaacctccggctcgttttgtttgtgataaacaaatattttcaagat
tttgcaaatggtccaagatttcaagacctttgtcaggctggagttaaaggacttatcaca
gccatcgaccgctttgaaccaagaaggagattccgtctttctacatacggccttttttgg
attaggcatgcaattatacgttccatgaccctatcaagcttcacgcgtgtctcatttgga
cttgaatcagttagagtagaaatccaaagagccaaactggaattattgtttgaacttcat
agagaaccgacagacgatgaagtaatcaaaagagttgggatttcccccgagaggtaccaa
gaagtaatgagggcctcgaaacccgttgtatctcttcatttgaggcattccgtcacacaa
gaagagttcattagtggaatcaccgatgtcgatggtgttggaggcgatcaccgaaggcaa
cctgctcttctcaggcttgcacttgatgatgtgctcgattctctgaagccaaaagagagc
ctggtaatcaggcagagatacggactcgacggtaaaggtgatagaacattaggagaaatt
tctgggaacttaaacatttcgagagaaatggtccgaaagcacgaagtaaaggcacttatg
aagctcaagcatccagcccgagttgattatctccgccgatacgtcgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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