KEGG   Gossypium hirsutum (upland cotton): 107930064
Entry
107930064         CDS       T04793                                 
Name
(RefSeq) general transcription factor IIE subunit 2
  KO
K03137  transcription initiation factor TFIIE subunit beta
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107930064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107930064
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     107930064
SSDB
Motif
Pfam: TFA2_Winged_2 TFIIE_beta DUF6438 Syntaxin-18_N
Other DBs
NCBI-GeneID: 107930064
NCBI-ProteinID: XP_016717113
UniProt: A0A1U8LUK8
Position
D08:60717400..60721237
AA seq 283 aa
MALQEKLDRFKQQQEKCQSMLSNIAAKSASSRSTPKPAPAAASPFPSARPSAPVKFSNDT
ERLQHINSIRKAPVGAQMKRVIDILFQTRQAFTPEQINEACYVDVNGNKDVFEGLRKNPK
VNYDGKRFSYKAKHDVKNKNELLVLIRKYIEGIAVIDLRDAYPNVMEDLQGLKAAGQIWL
LSNFDSQEDIAFPNDPRVPIKVDDDLKELFRSIELPRDMLDIEKDLQKNGMKPATNTAKR
RAAAQVQGITSKPKPRQKNKEFSKKAKLTNAHLPELFQSLKNS
NT seq 852 nt   +upstreamnt  +downstreamnt
atggcattacaagagaagttagatagatttaaacagcagcaggagaagtgtcagtcgatg
ctctccaacattgcagcaaaatcagcatcttctaggtccacaccaaaacctgcacctgcg
gccgcctccccctttcccagtgcaagaccgtctgctcctgtcaaattctcaaatgatacc
gagaggcttcagcacattaacagcattcgaaaagctcctgttggagctcaaatgaagcgt
gttattgacattctgtttcagacaaggcaagctttcacaccagagcagatcaatgaagca
tgttatgttgatgtgaatgggaacaaagatgtctttgagggcttgaggaaaaacccaaaa
gtgaactatgatggaaagcgcttctcttacaaggctaagcatgacgttaaaaacaagaat
gaacttcttgtcttgattcggaaatatattgaaggcattgctgttattgatctcagggat
gcatacccgaatgtgatggaggacttgcagggtctgaaagctgcaggtcagatttggctg
ctatcaaattttgattctcaggaggacattgccttcccaaatgatcccagggtgcctatt
aaggttgatgatgaccttaaagagctatttcggtctattgaattgccacgagacatgctc
gacatcgaaaaagatctccaaaagaatggcatgaaacctgctactaacacagcaaaaagg
agggctgctgcacaagtccaaggaattacctccaaacccaaacccagacagaaaaacaaa
gagttctccaagaaggccaagctaaccaatgcacatcttccagaacttttccagagtctt
aaaaattcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system