KEGG   Gossypium hirsutum (upland cotton): 107933994
Entry
107933994         CDS       T04793                                 
Name
(RefSeq) polygalacturonase-like isoform X1
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Module
ghi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107933994
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     107933994
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 107933994
NCBI-ProteinID: XP_016721806
UniProt: A0A1U8M4R8
Position
A07:14651854..14654425
AA seq 422 aa
MAIQFNFISSMLILLLLTRSFAKAREAGGGGGGSGGGGGGGVIDVVAKFGAKADEKTDLS
KPLLDAWKEACASTSPAKIVIPKGTYFLSTATLDGPCKAPIELQVEGTMKAPADPSAFKE
PKWIAFNRIENIKLSSGGVFDGQGTTAYKREGCDKHNFCGSLPINLRFDFLTNAMIQGIT
TKDSKQFHVNVLGCKNITFEHFTVSAPGESPNTDGIHIGRSDGVNVLNTEIKTGDDCVSI
GDGSKNLVINGVTCGPGHGISIGSLGLFKNEEPVDGVIVKNCTLTNTSNGVRIKSWPGAE
PGTCSNIHFEDITVTNVSSPIIIDQKYCPWNKCKINEESKVKLSNISFKNIHGTSALLEA
VKIICSATLPCENVELADIEITHSGPTGPAVSQCSNVKPKVSGKQNPAACSAPVPANPTP
TS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggctattcaatttaattttatttcatccatgttaatactattacttttaaccaggtca
ttcgctaaagctcgagaagctggtggtggtggtggtggcagtggaggaggaggtggaggt
ggcgttattgatgttgttgcaaagtttggtgctaaggcagatgagaaaacagatttgagt
aagccattgttggatgcttggaaagaagcatgtgcctcgacatctccggcaaaaattgtg
attcctaaagggacatattttttaagtacagctaccttagatggtccttgcaaggctcct
attgagcttcaagttgaaggcactatgaaggctccggcagaccctagtgctttcaaggag
cctaaatggattgccttcaatagaattgaaaatatcaaattgtctagcggaggagttttc
gacggccaaggaaccactgcttataaaagggaaggttgcgacaagcataatttttgtggt
tcacttcctattaacctaaggtttgattttttaaccaacgcaatgatacaaggtataact
accaaagacagcaagcaattccacgttaatgttctaggatgcaaaaacattactttcgaa
catttcaccgtatcagcacctggagaaagcccaaacacagatgggattcacatcgggaga
tcagacggggtcaatgttcttaacacggagataaaaactggtgatgattgtgtttcaatt
ggggatggttccaaaaatttggttatcaatggagtaacttgtggaccaggacatggtatc
agtattggcagtctaggattgtttaaaaatgaagaacccgttgatggagttattgtaaaa
aattgcaccttgactaatacttcaaatggtgttagaatcaaaagttggccaggcgctgaa
cccggcacttgttcgaacattcactttgaggatattacagtgaccaatgttagttctcct
attataattgatcagaaatattgcccatggaacaaatgcaaaataaatgaagaatcaaaa
gttaaactaagcaacattagtttcaaaaacattcatggcacttctgcgcttctagaagct
gtcaagattatttgcagcgctactttgccgtgtgaaaatgtggaactcgccgacattgaa
attacacacagtggaccgactggacctgcagtatcacaatgttcgaatgtgaaacctaaa
gttagtggcaaacaaaatccagctgcatgttccgcccctgtcccagcaaaccctaccccc
acctcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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