KEGG   Gossypium hirsutum (upland cotton): 107937451
Entry
107937451         CDS       T04793                                 
Name
(RefSeq) autophagy-related protein 8f
  KO
K08341  GABA(A) receptor-associated protein
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    107937451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107937451
   04121 Ubiquitin system [BR:ghi04121]
    107937451
   03029 Mitochondrial biogenesis [BR:ghi03029]
    107937451
Membrane trafficking [BR:ghi04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    107937451
Ubiquitin system [BR:ghi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   107937451
Mitochondrial biogenesis [BR:ghi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    107937451
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 107937451
NCBI-ProteinID: XP_016725823
UniProt: A0A1U8MJP4
Position
D08:3560530..3563029
AA seq 117 aa
MAKSSFKIEHDFEKRRAEAARIRVKYPDRIPVIVEKTKGNDIPNIDKKKYLVPADLTVGQ
FVYVIRKRIKLSAEKAIFLFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG
NT seq 354 nt   +upstreamnt  +downstreamnt
atggctaaaagtagcttcaagatcgagcatgactttgagaaaaggcgcgctgaggctgca
agaattagggtaaaatacccagatagaattccagtgattgtggagaagacgaaaggaaac
gacatccctaacattgacaagaagaaatacttagtaccagctgacttgacagtgggtcaa
tttgtctatgtgatccgaaaaagaatcaaattgagtgctgaaaaggctatcttcttattt
gtggacaatgtcctccctccaactggagcaattatgtcaaccatctatgatgaaaagaag
gatgaagatggatttctgtatgttacatacagtggggaaaatacatttggttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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