KEGG   Gossypium hirsutum (upland cotton): 107938696
Entry
107938696         CDS       T04793                                 
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4
  KO
K18999  RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ghi01009]
    107938696
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107938696
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     107938696
Protein phosphatases and associated proteins [BR:ghi01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   107938696
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     107938696
SSDB
Motif
Pfam: NIF BRCT PTCB-BRCT BRCT_2
Other DBs
NCBI-GeneID: 107938696
NCBI-ProteinID: XP_016727412
UniProt: A0A1U8MKQ9
Position
D02:complement(1482581..1488551)
AA seq 470 aa
MSFATDSPVHSSSSDDFAALIDAELEVGSSGSSPDEQDNEEEEVDADSDDDDSDDEEDDS
NDDLNDHRNKRCKTEKLDDLEGPQGSTSQGLIEEKLEVSLNKDTCTHPGSFGQMCILCGQ
RVDDESGVTFGYIHKGLRLGNDEIVRLRSTDMKNLLRHKKLYLVLDLDHTLLNSTQLNHL
TAEEEYLKGQSDSLQDVSKGSLFMLEFMHMMTKLRPFVRTFLKEASEMFEMYIYTMGDRP
YALEMAKLLDPKKEYFNGRVISRDDGTQKHQKGLDVVLGQDSAVVILDDTENAWTKHKDN
LILMERYHFFASSCRQFGFDCRSLSQLKSDESEPDGALASILKILRQIHHIFFDELDSDL
ASRDVRQVLKTVRKELLKDCKIVFSRVFPTKFQPENHLLWKMAEQLGATCSTETDSSVTH
VVSMDAGTEKSRWAVKENKFLVHPRWIEAANFFWQKQPEEKFPVSQTKNQ
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgagttttgcaactgattccccagtacactcgtctagcagtgacgattttgctgcatta
attgatgcggagcttgaagttggttcttcaggctcatcgccagatgaacaagacaatgaa
gaggaagaagttgatgctgatagtgatgatgacgacagcgacgatgaagaggatgacagt
aatgatgaccttaacgatcataggaacaaaaggtgcaagaccgagaagttggatgaccta
gaaggacctcaagggtcaacctctcagggtttgatagaagaaaagttagaagtatccttg
aacaaggatacatgtacacatcctggttcttttggacaaatgtgcatcctttgtgggcaa
agagtggatgatgaatccggtgtaacatttggttatatacataagggtttaaggctcgga
aatgatgaaattgttcgattacgcagcacagacatgaaaaatctgttacgtcataaaaag
ctttacttagttcttgatttagaccacacactccttaattctactcaactcaatcaccta
acagctgaggaagaatatttgaagggccaatctgattctcttcaagatgtttcaaagggc
agcctgttcatgttggaatttatgcatatgatgaccaaattgaggccctttgttcgtaca
tttctcaaagaagcaagtgagatgtttgagatgtacatttatacaatgggcgatcgaccc
tatgcgctagaaatggctaaactgcttgatccaaaaaaagagtacttcaatggccgagtg
atttcacgagacgatggcacccagaaacaccaaaagggtcttgatgtggtactagggcaa
gacagtgccgtcgtgatcctggacgatacagaaaatgcatggacgaagcataaagacaat
ctgatactgatggagagatatcatttctttgcttcgagttgtcgccaattcggcttcgat
tgcaggtctctttctcagttgaagagtgacgaaagtgagcccgatggagcacttgcttcc
attcttaaaatacttcgacaaatccaccatattttcttcgatgaacttgattccgatctt
gctagccgagatgtgaggcaggtcctgaaaacagttcgtaaggaactgttgaaggattgc
aaaatcgttttcagccgtgtttttcccactaaattccagccagagaatcatcttctatgg
aaaatggcagaacagttaggagctacgtgttcgaccgaaactgattcttcagtaacacac
gtcgtttcaatggatgctggaacggaaaagtcccgttgggctgtgaaagagaacaagttt
ttggtccatccgcggtggatagaagctgcaaatttcttttggcagaaacaacccgaagaa
aaatttccagttagccaaactaagaatcaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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