KEGG   Gossypium hirsutum (upland cotton): 107941017
Entry
107941017         CDS       T04793                                 
Name
(RefSeq) ESCRT-related protein CHMP1B
  KO
K12197  charged multivesicular body protein 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107941017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107941017
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107941017
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    107941017
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107941017
  Exosomal proteins of other body fluids (saliva and urine)
   107941017
  Exosomal proteins of colorectal cancer cells
   107941017
SSDB
Motif
Pfam: Snf7 Ist1 Ham1p_like Baculo_PEP_C
Other DBs
NCBI-GeneID: 107941017
NCBI-ProteinID: XP_016729997
UniProt: A0A1U8MT37
Position
A05:complement(13018268..13019606)
AA seq 203 aa
MGNTEKLLHQIMELKFTSKSLQRQARKCEKDEKSEKLKVKKAIEKGNMDGARIYAENAIR
KRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLNTGNLQKMSETMDQ
FEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPGAHAVS
TKTEEKVDEDDLSRRLAELKARG
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggaaacaccgagaagctcctgcaccagatcatggaactaaaattcacgtccaaatcc
ctgcagcgccaggccaggaagtgcgagaaggacgagaaatctgagaaattgaaggtcaag
aaggccatcgagaaaggtaacatggacggagctcgtatctacgccgagaacgccattcgg
aagcgcactgagcagatgaactacctccgcctcgcgtcgcgcctcgatgctgtggttgcc
aggctcgatacccaggctaagatgaccaccattaataaatccatggctaatatcgtcaag
tctctcgaatcttccttgaacacaggcaatttgcagaagatgtcagagacaatggatcaa
tttgagaagcagtttgtgaatatggaggtccaggcagaatttatggagagtgctatggcc
ggttccacttcattgtccacaccagaaggtgaggtcaacagcttgatgcagcaagttgct
gatgactatggcttggaggtctctgttgggttgccacaacctggtgctcatgctgtgtcg
accaagacagaggagaaggttgacgaggatgatttgtcgaggcggcttgcagagcttaag
gctagaggttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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