KEGG   Gossypium hirsutum (upland cotton): 107944250
Entry
107944250         CDS       T04793                                 
Name
(RefSeq) tubulin alpha-5 chain
  KO
K07374  tubulin alpha
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04145  Phagosome
ghi04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107944250
  09142 Cell motility
   04814 Motor proteins
    107944250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107944250
   03036 Chromosome and associated proteins [BR:ghi03036]
    107944250
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ghi04812]
    107944250
   04147 Exosome [BR:ghi04147]
    107944250
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107944250
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     107944250
Cytoskeleton proteins [BR:ghi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    107944250
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107944250
  Exosomal proteins of other body fluids (saliva and urine)
   107944250
  Exosomal proteins of colorectal cancer cells
   107944250
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 107944250
NCBI-ProteinID: XP_016733557
UniProt: A0A1U8MZI2
Position
A13:complement(109346352..109348586)
AA seq 449 aa
MREIISIHIGQAGIQVGNSCWELYCLEHEIQPDGMMPSDTSVGVANDAFNTFFSETGSGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGVEDEEDAEDY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagggaaatcataagcattcatataggtcaagctggtattcaagtcggtaactcatgt
tgggagctttactgccttgaacatgaaatccaacccgatggaatgatgcccagtgacacc
tctgtaggtgtagcaaatgatgctttcaacactttctttagtgaaactggttcagggaaa
catgttcctagagctgtgtttgtggatctggaacctactgtgatcgatgaagttaggact
gggacttaccgacaacttttccaccctgaacagcttatttctggcaaagaagatgctgcc
aataactttgccagaggccattatacaattgggaaggaaattgtggatctttgccttgac
cgtgttaggaagttagctgataactgcactggtttacaagggtttcttgtgttcaatgct
gttggtggtggaactggttctggtctgggatctttgttgttagaacgcttgtcggtggat
tatggtaaaaagtcaaagcttggtttcaccatctacccttcaccacaggtctcaacagct
gttgtggagccttacaacagtgttctgtctactcattcccttcttgagcacactgatgtg
gctgtgctcttggataatgaagcaatttatgacatatgccgtcgttcccttgatattgag
aggccaacttacactaacttgaaccgtttgatatctcaaatcatatcatccttgacaact
tctttaaggtttgatggagctatcaatgtggatgttactgagttccaaaccaatttggtt
ccatacccccgtatccatttcatgctctcttcatatgcacctgtcatctcagctgagaaa
gcataccatgaacaattgtcggttcccgagatcacaaatgctgtgtttgagccttcaagc
atgatggcaaaatgtgaccctaggcatgggaagtacatggcatgttgcttgatgtatcga
ggagatgtcgtccccaaggatgttaatgctgctgttgctaccatcaaaacaaagaggacc
gtgcagttcgttgactggtgccctactggcttcaaatgtggtattaactatcagcctcca
actgttgtacctggaggagatctcgctaaggtgcagcgagctgtttgcatgataagcaac
aacacagcagtggctgaggtgtttgcacgcattgaccacaagttcgatctcatgtactca
aagagagctttcgtgcattggtatgttggtgagggcatggaagaaggagagttctctgaa
gctcgtgaggatctggctgctctcgaaaaagattatgaagaagtcggagccgaaggtgta
gaggacgaagaggatgccgaagactattga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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