KEGG   Gossypium hirsutum (upland cotton): 107944635
Entry
107944635         CDS       T04793                                 
Name
(RefSeq) probable pectate lyase 4
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107944635
Enzymes [BR:ghi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     107944635
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 107944635
NCBI-ProteinID: XP_016733934
UniProt: A0A1U8N820
Position
D12:complement(61050453..61051807)
AA seq 381 aa
MATTLSWCFTLALFMVILMASISSSLANMANMNVIDKCWRGNPLWRSQRQQLAKCSVGFA
GKMINNIGKDVVKYKVTDLSDDPLSPKSGTLRYGTTMIKGKVWITFKNSMTITLQRPLLL
SSFTAIDGRGVNVHITGAGCLLVYQVTDIIIHGLRIHHCRAQPPSTVMGPNAKVIPLGQM
DGDAIRLVTARKVWIDHNTLYECQDGLLDVTRGSTNVTVSNNWFRNQDKVMLLGHDDGHL
RDRNMMVTVIFNHFGPNCNQRMPRVRHGYAHVANNFYQGWEQYAIGGSMSPSIKSEANFF
VAPNDVGNKEVTWRKGEKGLWKFYSVGDVLKNGASFNKQTGVGGAKPNYSQEQNFKVVNA
MFVKELTSESGVLQCSRSLIC
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggctacaacattatcatggtgcttcacattggcccttttcatggtcattctaatggca
agtattagttcgagtttggctaatatggctaatatgaatgtaatcgataaatgctggaga
gggaaccctctttggcggagtcaacgacaacaattggccaaatgctccgtcggttttgcc
ggcaaaatgatcaacaacattggcaaagacgttgtgaagtacaaggttaccgatctttcc
gatgaccctttgagtcctaaatcagggacccttcgttacggaaccacaatgatcaaagga
aaagtatggatcacattcaaaaacagcatgaccatcacactccaaagaccacttctctta
agtagcttcaccgccatcgacggtcgtggcgtcaatgtccacataactggcgcggggtgc
ctgttggtgtaccaagtgaccgatataatcatccatgggcttcgcatccaccattgcagg
gcccaaccacctagcactgtgatgggtccaaacgcaaaggtgatccccttaggccaaatg
gacggagatgctataagattagtcactgcgagaaaagtgtggatcgatcataacacattg
tacgagtgtcaagacggtctccttgatgtcactcgtggttccaccaatgtcaccgtgtcg
aacaattggtttaggaaccaagataaagtcatgctcctcggacacgatgacggtcatttg
agagacagaaacatgatggtcaccgtcattttcaaccatttcggacctaattgcaaccaa
agaatgccaagagttcgtcatggatatgcacacgtagcgaacaatttctaccaaggatgg
gagcaatacgctattggtggaagcatgagccccagcataaagagcgaagccaattttttt
gttgctccgaatgatgttggaaacaaagaggtaacgtggagaaaaggagagaaaggttta
tggaaattttattcagtaggggatgtattaaaaaatggagcatctttcaacaagcaaact
ggtgtaggtggggcgaagcctaactatagccaagaacagaattttaaggttgtcaatgct
atgtttgttaaagaattgacgagtgaatctggtgttttacaatgctctaggagtttaata
tgctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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