KEGG   Gossypium hirsutum (upland cotton): 107945583
Entry
107945583         CDS       T04793                                 
Name
(RefSeq) eukaryotic translation initiation factor 4G
  KO
K03260  translation initiation factor 4G
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107945583
   03012 Translation factors [BR:ghi03012]
    107945583
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     107945583
   mRNA cycle factors
    Stress granule specific factors
     107945583
Translation factors [BR:ghi03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    107945583
SSDB
Motif
Pfam: MIF4G MA3
Other DBs
NCBI-GeneID: 107945583
NCBI-ProteinID: XP_016735127
UniProt: A0A1U8N7N4
Position
D12:complement(38565903..38573580)
AA seq 1899 aa
MSFNQSRSDKSEQQYRKSGRSASFNQQRSSSGVYSKGAGGGPAPSRSPSSSSSLSSNRSL
KKSSNAQGGQYRLNSPAVSSTESSSTSAARTKPNGAHLQPQLLGASDASIAGNAAQPVQS
HTIQNSTRTVSNPPTSQPAAISSDTSFPSTSEKEDASKPFSLQFGSITPGFMNGMQVPAR
TSSAPPNLDEQKRNQARHDSSFKCVPNLPIPIPKQQLARKDSVATEQSSSGEVYPVPKIK
KDAQPSPVPPANQTQKPSPLNIPMTSMQMPFHHQPHVPIQYGGPNPQIQSQSVTASSMQM
PMHISLAMGNGPQVQQQVFVAGLQALPLPPQGMMHQGGGLSFTPSIGGHLPPQLGNLGMG
ITPQYSQQQGGKFGVSRKTTPVKITHPDTHEELRLDKRTDTRADGGSSVPRPHPNMPIQS
QPIPSFAPSQSINYYSNSYNTKSGFYPPPSSRPLASNQIAPNAQGPRFSYPGSQGHQNIS
FMNSAAAHGSLAVNKSVHLVRGSLESANVEPVRDAQNVMPFTTSGLTQVTVKPASVSAGE
KFEDSSSSCILPSIEKAGALKPSTPASEVSSSEAQRDLDTCQESSAQQPKSGNESLTSES
LPAAAKHSGGVPVTNLDESQTSSCVSSASDSTSRESTLVLASNEGKRREGLSRSNSIKNY
QKKPGQEGQIQPPVQSTSTSNLATNPAECGVSSDGAVTEALEAKKALTSLAAVDVLSQST
GELPSINDALPSSLDPKTESKIESLNTVSSEVSGTGSKVDSFDIVQHAKIDGSSKLDERP
RSEISGINEEEKHFPEEHLSSQLVPLKSTEVKSDQDSASKVVATNNVVRTPGTEQRVHNE
DLGGKVENEEATDSKDISTSRVADPTGIESSHVLMTFGSNPSSSASNSYEMTATKTVISS
QQSAPVPTPDLLESTSNYEGEGVLLTNSKNKPAPQLSRTKSTITSGRKKLKEILQKADAA
GTTSDLYMAYKGPEEKKETVAPLASTEISSVGVNLKQASHEALQVDAIESEKITQSKAEL
DDWEDAADISAPNMETSDTDEQAHGGLASHEEDGSGNIKKKYSRDFLLKFAGQYTDLPQG
FEIASDIAAALMASNVNASHAVDHDSYPSPGRKLDRQSSGSRVDRRASGIVDDDRWIRPP
GSFGPGRDLRLDLGYGAVAGFRPVQGGNFGFLRLPRAQTPLPYLGGVPAGPMPHMSPHAG
MQHSGPDADRWHRGVMYQQKGMIPSPQSPLQTMHRAERKYQVGKVADEEEAKQRQLKGFL
NKLTPQNFEKLFEQVKAVDIDNAGTLTGVISQIFDKALMEPTFCEMYANFCQCLAGELPD
FIENNEKITFKRLLLNKCQEEFERGEREQEEANKIEEEGEAKLSEEEREEKRIKARRRML
GNIRLIGELYKKKMLTERIMHECIKKLLGEYENPNEEDVEALCKLMSTIGEMIDHPKAKV
HMDAYFEMMAKLSNNMKLSSRIRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQER
QAQSSRLARGPGFNAAARRASTDFSARGSILSSPGSQMDSFRGLQGQPHSSGAQDVRMDD
RQSLESRTLSVPLPQRPTGDDSITLGPQGGLGRGMSFRGPSVMSSTPLANISPISVDSRT
AGSNGFSSVSERMTYGPREDLMARFGSDRFAPTAAYEQPSSQERGMHFGNRDSRTPDRSF
ARPLAASPSSQGQSSGFSQNIPPEKGCSEERLHDLSMEAIKEFYSARDEKEVALCIKDLN
SSSFHPTMIALWVTDCFERKDMERDLLAKLLVNLTRSHDGVLSQAELVKGFESVLSTLED
AVNDAPKAPEFLGRIFGKMIVENVMSLKEIGRLIGEGGEEARQLVEIGLGGDVIGSTLGM
IKRERGESVLNEIRGSSCLRLEDFRPSHPNRSRILETFL
NT seq 5700 nt   +upstreamnt  +downstreamnt
atgtccttcaatcaatctaggtccgataaaagcgaacaacaataccgaaaatccgggcga
tcagccagttttaatcaacagcggtcctcctcaggcgtttacagtaagggcgctggcggc
ggccctgccccttcgcggtctccttcttcatcttcttctttgtcttctaatcgaagtctt
aagaagtctagcaatgcacaaggagggcaataccggttaaattcaccggccgtgagttct
accgagtctagtagtacttctgctgcccgcaccaaaccaaatggtgctcatttgcaaccc
cagttactgggagcatcagatgcatcaattgcaggcaatgctgcccagcctgttcaatcg
cacaccattcagaatagcactcgaactgtttcaaaccctccaacttctcaacctgcggcc
ataagttctgacactagttttccttcaaccagcgaaaaggaagatgcatccaaaccattc
tctttacagttcgggtccataactcctggtttcatgaacggaatgcaggttccagctcga
actagctcagcacccccaaatttggatgaacagaaacgtaatcaggcacgccatgattct
tcttttaaatgtgtgccgaatttgcccattcccattcctaaacagcagctagcaagaaag
gattcggttgcaactgagcaatctagttctggggaggtttatccagtgcccaagataaaa
aaagatgcacaaccttctccagtaccccctgcaaaccagacacagaagccgtctcctctt
aatataccaatgacatctatgcagatgccatttcatcaccagcctcatgttcccattcaa
tatggtgggcctaatccacagattcagtctcaaagtgttactgccagttcaatgcaaatg
ccaatgcatatctccttagctatgggaaatggaccccaggtgcagcagcaagtctttgtt
gcaggtcttcaggctcttccattgccacctcaagggatgatgcatcagggtgggggcttg
agtttcacaccatccataggtggccaccttccgcctcaattgggcaacttggggatgggc
attacccctcagtattctcaacagcaaggtggaaagtttggtgtttcacgtaaaaccact
cctgtcaagattactcaccccgatactcatgaagaattaaggcttgataaacgaacagat
acacgtgcagatggtggttcttcagttccaaggcctcatcctaacatgccaatccaatcc
cagccaattccatcctttgctccttctcagtcaatcaattactattccaattcctataat
accaaatctggattttatccgccaccaagttcacggccattggctagtaaccagatagca
cctaatgcccaaggaccgagatttagctatcctggtagccagggtcatcaaaacatttct
ttcatgaattcagcagctgcccatggttcattggcagttaataaatccgttcatcttgtt
cgtggcagtttagaatcagcaaatgtggaacccgtacgtgatgcacaaaatgttatgccc
tttactacttcaggtttaacacaggtgacagttaaaccagcttctgtttccgccggggag
aagtttgaagattcctcttcttcttgtatcttgccttctattgaaaaggctggggcacta
aaaccttctacaccagctagcgaggttagttcatctgaggctcaaagggacttggatact
tgccaggagagctctgcacaacagccaaaatctggtaatgaatctttaacatctgagtca
ttaccagctgcagctaaacactctggtggagttccagtgactaacttggatgagagccag
acatctagttgtgtatcgtctgcttcagattccacgtctagggagtctacgctagttctt
gccagtaatgaaggcaagaggagggagggattgagcaggtcaaactctataaaaaattat
cagaagaaaccaggtcaggaaggacaaattcagccaccagttcagtctacatcaacatcc
aacttggctaccaaccctgcagaatgtggtgtttcttcagatggtgcagttactgaagct
ctagaggctaaaaaagctttaacatcattagcagctgttgatgttttgtcacaatctacc
ggggaattaccatccattaatgatgctttgccttcttccttagacccgaagacagagagc
aagatagaaagcttaaacactgtttcttctgaagtttctggtactggcagtaaagttgat
agctttgacattgttcagcatgctaagattgatggttcttccaagctggatgaacgacca
aggtctgaaattagtggaattaatgaagaggaaaaacattttcctgaagagcacttatct
tctcaactggttcccttgaaatctacagaggttaaatctgaccaggattctgcatcaaag
gtagtagctaccaacaatgttgttcgtaccccaggaactgagcagagggtacacaatgaa
gatttgggaggcaaggtagaaaatgaggaagccactgatagtaaggatatctctacctct
agagttgctgaccctactggtatcgaaagttctcatgttctcatgacctttggttccaat
ccttcttctagtgcctctaatagctatgagatgactgctactaaaactgtaatatcatct
cagcagtctgcacctgtcccaactcctgacctcttggagtcaacttcaaattatgaaggg
gaaggtgttctgctaactaattcaaagaacaaaccagcgccacaacttagtaggacaaag
agtactataactagtgggaggaaaaaactaaaagaaattcttcagaaagcggatgctgct
gggacaacttctgatctctatatggcgtataaaggtcctgaggaaaagaaagagactgtc
gcacctttagcaagtacagaaatcagttctgttggtgttaatttgaaacaggcatctcat
gaggcccttcaggtggatgccatagaaagtgagaaaattacacagagtaaagctgaactc
gatgattgggaagatgctgctgacatatctgcaccaaacatggaaacttcagacactgac
gaacaggctcatgggggattagcaagtcatgaggaagatggaagtgggaatataaagaag
aagtattccagagattttcttcttaagtttgcaggacaatatactgatcttccacaggga
tttgagattgcttctgatattgcagcggccttgatggcatcaaatgtcaatgcatctcat
gctgttgatcatgattcataccctagtcctggaagaaaattggataggcaatctagtgga
tctcgagtagatcgccgtgctagtggaattgttgatgatgacagatggattagaccacct
ggttcttttggccctggaagggatctgcggcttgatcttggttatggtgctgttgcaggt
tttcggcctgtccaaggaggtaactttggttttctaaggctcccgcgggcacaaacacct
cttccatatcttggaggggttcctgctggaccaatgccacatatgagtccacatgcaggg
atgcagcacagtgggcctgatgctgacaggtggcatcgtggtgttatgtatcagcaaaag
ggtatgattccctctccacaaagtccactgcagacaatgcacagagctgaaaggaagtat
caagtgggtaaagtggctgatgaggaagaggccaagcaaaggcagctgaagggctttttg
aacaagctaacccctcaaaattttgagaaactctttgagcaagtaaaagctgttgacatt
gacaatgcaggtacactcactggtgtcatctcacagatctttgacaaagctttaatggag
cctactttttgtgaaatgtatgcaaacttctgccagtgtctagctggggagttgcctgat
tttattgaaaacaatgaaaagataactttcaagagattgctgctgaacaagtgccaggag
gaatttgagagaggggagagagagcaagaagaagcaaataaaatagaggaagagggtgag
gctaagctgtctgaggaagaaagagaggagaagagaatcaaggctcgaagacgaatgtta
ggtaacattagacttattggggagttgtacaagaagaaaatgttaactgagagaataatg
catgaatgcatcaagaaactacttggtgaatacgagaatcctaatgaggaagatgtcgag
gcattgtgcaaattaatgagtacgattggagaaatgattgaccatcctaaggcaaaggtg
catatggatgcttattttgagatgatggcgaagttgtcaaacaatatgaaattatcttct
aggatcaggttcatgttgaaggatgctattgatctgagaaagaataaatggcagcagagg
aggaaagttgaagggcctaaaaagattgaggaagtgcacagagatgctgctcaagagcga
caagcacaatccagtaggcttgctcgtggtcctggcttcaatgctgctgcaaggagagca
tccacggattttagtgcacgagggtcaattttatcttctccaggttctcaaatggatagt
ttccgggggctgcagggtcagcctcatagttctggggctcaggatgttcgcatggatgac
agacagtctttggagtctaggactctgtcagttcccttgcctcaaagacctactggtgat
gattctattactttgggcccccagggtggccttggtagagggatgtcttttagaggacca
tctgtaatgtccagtactcccttagctaatatttctccaatttccgtagattcaagaact
gctggatcgaatggatttagttctgtatcagagcgaatgacttatggtcctagagaggat
ctcatggcaaggtttgggtcagataggtttgcaccaacagctgcttatgagcagccaagt
tcccaggaacgtggcatgcattttggtaatagggactcgaggaccccagatcgcagtttt
gctagacctcttgcagcttcaccttcttcgcaaggccaatcatctggtttcagtcaaaat
attcctcctgaaaagggctgttccgaggagcgtctgcatgatttgtccatggaggcaatt
aaagaattttacagcgctagagatgagaaagaagttgctttgtgcatcaaagatttgaat
tcttcaagcttccatccgacgatgattgcgctatgggtaacggactgttttgagaggaaa
gacatggaacgggatcttttggcgaagctacttgtcaacctgacaaggtcccatgatggt
gtattgagccaggctgaacttgttaaagggtttgaatctgtcctgagtacattggaggac
gcagtgaatgacgcgccaaaagctccagaatttctgggacgtatttttgggaaaatgata
gtagaaaatgtgatgagtctgaaggagataggacggttaataggtgagggtggggaggaa
gcaaggcagctagtggaaatagggctgggcggggatgttattggaagcaccttggggatg
attaaaagagagagaggagaaagtgtgttgaatgaaattagaggtagctcctgtttgcgg
ctggaggactttcggccttcgcatcccaacagatcaaggattttagaaacttttctttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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