KEGG   Gossypium hirsutum (upland cotton): 107946680
Entry
107946680         CDS       T04793                                 
Name
(RefSeq) ABC transporter B family member 2-like
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    107946680
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ghi02000]
    107946680
   04147 Exosome [BR:ghi04147]
    107946680
   04090 CD molecules [BR:ghi04090]
    107946680
Enzymes [BR:ghi01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     107946680
Transporters [BR:ghi02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    107946680
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107946680
CD molecules [BR:ghi04090]
 Proteins
  107946680
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_29 AAA_22 Zeta_toxin AAA_16 RsgA_GTPase AAA_15 APS_kinase nSTAND1
Other DBs
NCBI-GeneID: 107946680
NCBI-ProteinID: XP_016736595
UniProt: A0A1U8NC47
Position
D12:56512151..56518700
AA seq 1248 aa
MTPYGSFNQDIDEDDTKKKEGKKKKDPKVPLLKLFSFADIYDYVLMGLGSIGACVHGASV
PVFFIFFGKLINVAGMAYLFPKEASHKVAKYSLDFVYLSVAILFSSWIEVACWMHTGERQ
AAKMRMAYLKSMLNQDISLFDTEASTGQVISAITSDIILVQDALSEKVGNFMHYISRFIV
GFCIGFARVWQISLVTLSIVPLIAIAGGLYAYVATGLIARVRNSYVKAGEIAEEVIGNVR
TVQAFAGEERAVKSYKEALMNTYKYGRRAGLAKGLGLGSMHCVLFVSWALLVWFTSIVVH
KNIADGGDSFTTMLNVVISGLSLGLAAPDISAFIRARVAAYPIFEMIERNTVSKTSSKTG
HKLGKVEGHIEFKDVSFNYPSRPDVVIFNRFSLNIPAGKIVALVGGSGSGKSTAISLIER
FYEPLAGEILLDGNNVRDLDLKWLRQQIGLVNQEPALFATTIRENILYGKYDATLGEITR
AAKLSGAITFINNLPDRFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALD
AESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQSGKIVETGSHDELISNPNSA
YSSLVQLQETSSLQRYPSQSPAMSTPRSLSYSRELSRTRTTFGASFRSDKDSVFSRLGAE
GIDTGKPVSPRRLYSMIGPDWYYGVFGTIAALIAGAQMPLFALGVSQALVAYYMDWETTC
NEVKKIATLFCCAAVITVIVHAIEHLCFGIMGERLTLRVREVMFSAILRNEIGWFDDPNN
ASSMLASHLESDATFLKGVVVDRTSILIQNLGLVVAAFIIAFILSWRITLVILATFPLII
SGHISEKLFMQGFGGDLSKAYLKANMLAGEAVSNIRTVAAFCAEEKIFDLYSRELVEPSK
RSFNRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIITALAMG
ETLALIPDLLKGNQMVASVFEIMDRKTQVVGDVGEEVTNVEGTIELRGVHFSYPSRPDVV
IFKDFDLKVRSGKSMALVGQSGSGKSSVLVLILRFYDPTAGKVMIDGRDIRKLKLKSLRK
HIGLVQQEPALFATSIYENILYGKEGASESEIIEAAKLANAHGFISSLPEGYSTKVGERG
VQLSGGQKQRIAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMRNRTTVMVAHR
LATIKNADQISVIQGGRIIEKGSHSSLIENKEGPYFKLINLQQQQHSS
NT seq 3747 nt   +upstreamnt  +downstreamnt
atgacaccttatggttcatttaaccaagatattgatgaggatgacacaaagaagaaagaa
ggaaagaagaagaaggatcctaaagttccattgttgaagttgttttcatttgcagacatt
tacgactatgtgctaatgggtttgggttccattggtgcatgcgtgcatggtgcatcggtt
cctgttttcttcatcttcttcgggaaattgataaacgttgctggaatggcttatctcttc
cctaaagaagcttctcacaaagttgcaaagtactcattggattttgtatatctcagcgtg
gctattttattttcctcatggatagaggtggcttgttggatgcatactggagagcgacag
gcagcaaaaatgaggatggcatatctcaagtctatgctaaatcaagacataagcttattt
gatactgaagcttcaacaggacaagtcatttccgccattacaagtgacattattcttgtt
caagatgctctttctgagaaggtggggaatttcatgcattacataagcaggtttatagta
ggtttctgcattggatttgcgagagtatggcaaatcagtttggtaacactgtcaattgtc
cccttgattgccattgccggtgggctttatgcttacgtagccacggggcttattgctaga
gttcgaaactcctatgtcaaggccggtgaaattgcggaagaggtgatcgggaatgttaga
acagtccaagcatttgcaggggaagaaagggccgtcaaatcatataaagaagcattgatg
aacacatacaagtatggcagaagagctggcttagccaagggcctcggactgggctctatg
cattgcgtgcttttcgtttcctgggcgttgctcgtttggttcaccagtatagttgttcac
aaaaacattgccgatggtggggattctttcactaccatgcttaatgttgtcatctccggc
ctgtcactaggactggcagcacccgacatctcagcgtttattcgagcaagggtggctgcg
tatccgatatttgagatgatagagaggaatacagttagcaaaaccagctccaaaacaggc
cacaaactaggcaaagtggagggtcacattgaattcaaggacgtgtcattcaattacccg
tctcgcccagatgtagtaatcttcaataggttcagcctcaacatacctgctggcaagatt
gtagctcttgtgggaggaagtggctctgggaagagcacggccatatcattgattgaaaga
ttttatgagcctcttgcaggggaaattttgttggatgggaataatgttagggaccttgat
ctcaaatggcttagacaacaaattggtttggttaatcaggagccagcacttttcgcaaca
acgattagggagaatatcctttacgggaaatatgatgctactctcggagagataacacgt
gctgcgaaactttcaggggccattacgtttattaataatctccctgatagatttgagact
caggttggtgaaagaggaatacaactatcaggtggacagaagcaaagaattgcgatatct
cgagcaatagtgaagaatccatctatccttttacttgatgaagcaacaagtgcacttgat
gcggaatctgagaagagtgtgcaggaggcacttgaccgtgtgatggtgggacgaaccaca
gtcgtcgtggctcatcgactttctactattaggaatgcagacgtgatagctgttgttcaa
agtgggaagatagtagaaactggcagccatgatgagctcatttcaaatcctaacagtgcc
tactcttcactcgttcagcttcaagagacatcatcacttcaacgatacccctcgcagagt
cctgcaatgagtacaccacgcagcttgagttattcacgagaattatcccgaacaaggaca
acttttggtgcaagttttcgttccgacaaggattccgtatttagccgtttaggtgccgaa
ggaatagatacagggaagcctgtttcaccaagaagactatattctatgataggacctgac
tggtattatggggtctttggaaccattgctgcattaattgctggagctcagatgcctctc
tttgctctaggggtttctcaagctcttgtagcctattacatggactgggaaacaacatgc
aatgaagtgaagaagattgccaccctattttgctgtgctgcagttataactgtcattgtt
catgcaattgagcacctatgtttcggtattatgggagagcgactcactctccgtgtgcgt
gaagtgatgttttctgccattttgaggaacgaaattggatggtttgacgacccaaacaac
gcaagttccatgctagcatcgcatctagagagtgatgcaacatttctaaaaggtgtagtt
gtcgatcggacatcaattctcatccagaatctaggcttggtcgttgctgccttcattatt
gcattcatcttaagctggagaatcacacttgttatcttggccactttcccattgatcata
agtggtcacattagcgagaaactattcatgcaaggctttggaggtgacttgagcaaagca
tatctaaaagcaaacatgctcgctggtgaggctgtcagcaatattagaactgttgctgca
ttttgtgctgaggagaagatctttgatctttattcccgtgagctggtagagccttcaaag
cgttcgttcaaccgtggtcaaattgcagggatattctacggcatttcccagttcttcatc
ttctcatcttatggccttgccttatggtatggttctgttttaatggggaaggagctagct
agctttaaatccgtcatgaaatcatttatggttttgattataacggcattagccatggga
gaaactctggcattgattccagaccttttaaaagggaaccaaatggtggcatccgtgttc
gagattatggaccgaaagactcaagttgttggggatgttggagaagaagtaacaaatgtg
gaaggtacaattgagctaaggggtgtccactttagttatccatcaaggccagacgtagtc
attttcaaggactttgatctaaaagtgcgttcaggcaagagtatggcactggtggggcaa
agcggatccggtaaaagttcggttcttgttcttatacttcgattttatgatccaacagct
gggaaagtgatgattgatggcagagatatcaggaaactgaagctgaaatcccttcggaaa
cacattggtctagtgcaacaagaaccagctctttttgccacatccatttatgaaaacatc
ctttatggcaaagaaggagcttcagaatcagaaataatagaagcagcaaagcttgccaat
gcccatggtttcataagttccctccctgagggttactcaacaaaagttggggaacgagga
gtgcaactctcgggtggtcagaaacagagaatagccattgctcgagctgttctgaagaac
ccagaaatcttgctgcttgatgaagccaccagtgctctagacgtggagtcagagcgtgtg
gtgcaacaagctctcgacaggttaatgaggaaccgaacaacagttatggtggcacatagg
ctggcaactattaaaaatgcagatcaaatctcggttatacaaggaggaagaataatagag
aaagggagtcattctagtctcatagaaaacaaagaggggccgtattttaagttaatcaac
cttcagcagcaacagcatagcagctag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system