KEGG   Gossypium hirsutum (upland cotton): 107949862
Entry
107949862         CDS       T04793                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Module
ghi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107949862
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     107949862
SSDB
Motif
Pfam: Glyco_hydro_28 Beta_helix
Other DBs
NCBI-GeneID: 107949862
NCBI-ProteinID: XP_016740122
UniProt: A0A1U8NM88
Position
D03:13584343..13585166
AA seq 208 aa
MIQDITTKDSKQFHVNVLGCKNITFEHFTLSAPGESRNRDGIHIGRSDGVNVLNMEIKTG
DDCISIWDGSKNLVINGVTCGPGHGISICNLGLFKNEEPVDGVTVKNYTMTNTSNGGRIK
SWTESKVKLSNISFKKIRDTSALPEAAKIICSATLPSKNVELADIEITHSGPTGPTVSQL
SNVKPKVSGKQNPAVCSAPIPTKPTPAT
NT seq 627 nt   +upstreamnt  +downstreamnt
atgatacaagatataactaccaaagacagcaagcaattccatgttaatgttctaggatgc
aaaaacattacttttgaacatttcactttatctgcacctggagaaagccgaaacagagat
gggattcacatcgggagatcagatggggtcaatgttcttaacatggagataaaaactggt
gatgattgtatttcaatttgggatggatccaaaaatttggttatcaatggagtaacttgt
ggaccaggacatggtatcagtatttgcaatcttggattgtttaaaaatgaagaacccgtt
gatggagttacagtaaaaaactacaccatgactaatacttccaatggtggtagaatcaaa
agttggacagaatcaaaagttaaactaagcaacattagtttcaaaaaaattcgcgacact
tctgcgcttccagaagctgccaagattatttgcagcgctactttgccgtctaaaaatgtg
gaacttgcagacattgaaattacgcacagtggaccgactggacctacagtatcacaattg
tcgaatgtgaagcctaaagttagtggcaaacaaaatccagctgtatgttccgcccctatc
ccaacaaaacctaccccagccacttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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