KEGG   Gossypium hirsutum (upland cotton): 107950671
Entry
107950671         CDS       T04793                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107950671
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ghi01009]
    107950671
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107950671
   03036 Chromosome and associated proteins [BR:ghi03036]
    107950671
Protein phosphatases and associated proteins [BR:ghi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     107950671
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     107950671
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     107950671
SSDB
Motif
Pfam: WD40 ComGF Me-amine-dh_H
Other DBs
NCBI-GeneID: 107950671
NCBI-ProteinID: XP_016741047
UniProt: A0A1U8NPY7
Position
D03:10821404..10829194
AA seq 515 aa
MHGGDEVVTAPAGPPQPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRGG
RVVLFERTDTKDHGVSRRDLERMDYLISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANSALFLLSTNDKTIKFWKVQEKKVKKISDMNLDPSKAVGNGSIASSSNSSSPK
PCLANGSSLGGSYNYLSHDFSFPPGGLPSLHLPVVVTSQETNLVARCRRVYGHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNM
LAYSSSKGSIRLIDLRQSALCDSHAKLFEEPEAPGSRSFFTEIIASISDIKFAKDGRYIL
SRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGS
YSNLFRVFGCAPGSTEATTLEASKNPMRRQVQTPSRPSRPLSSITRVVRRGTETPGVDAN
GNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgcacggaggcgatgaggtggtcacagctccggcaggaccgccacagccgttggattgg
aaattctctcaggtttttggtgaaagaaccgctggagaagaagttcaagaagttgatatt
atttctgctattgaatttgataaaactggggatcatcttgccaccggtgaccgtgggggc
cgtgttgttctctttgagaggacagatacaaaggatcatggtgtatcaagaagggatctg
gagagaatggattatctaattagtcggcaccctgagtttcgttacaagacagagttccag
agccatgagcctgagtttgactacctcaagagcttggaaatagaggaaaaaatcaacaaa
atcagatggtgccaaacagccaatagtgccctttttctcctttccaccaatgataaaacc
atcaagttttggaaggtacaagaaaagaaagtcaagaaaatttctgacatgaatttggat
ccatcaaaagctgtaggaaatggcagcattgctagttcaagtaattcaagtagccctaaa
ccatgtcttgcaaatggaagctcccttggcggatcctacaactatttgagccatgatttc
tctttcccaccaggaggccttccatcgttgcatttacctgtggtagtaacaagtcaggag
accaacctagtggctagatgtcgacgggtatacggccatgctcatgattatcacatcaat
tctatttcaaataacagtgatggagaaacttttatatcagctgacgatctacgtataaat
ctttggaacttggaaattagcaatcaaagtttcaatattgtcgatgtaaagcctgcaaac
atggaggatctaactgaggttataacatcagcagagtttcaccctacccactgtaatatg
ctagcatatagtagttcaaagggctcaattcgcctcattgatttgcggcaatcagctttg
tgtgattctcatgccaaattgtttgaagaaccggaggcacctggttctagatcatttttt
acggagataattgcctcaatctcagatattaaatttgcaaaggacggaagatatattctt
agccgtgattatatgactcttaagttgtgggatatcaatatggattctggtccagttgca
acattccaggttcatgaatatttacgacctaagctttgtgatttgtatgaaaatgattcg
atctttgacaaatttgaatgttgcctaagtggtgatggattgcgagtggcaacaggctcc
tacagcaatctattccgtgtatttggttgtgcccctggaagcaccgaggcaacaactttg
gaagctagcaaaaatccaatgaggagacaagttcagactccctcaaggccttccagaccc
ctgagcagtataacacgtgttgttagacgaggaacagaaactcccggagtggatgcgaat
ggaaattctttcgatttcacaacaaagttactgcacctagcatggcacccaactgaaaac
tcgattgcctgtgctgctgcaaacagcttgtacatgtactatgcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system