KEGG   Gossypium hirsutum (upland cotton): 107951548
Entry
107951548         CDS       T04793                                 
Name
(RefSeq) tRNA pseudouridine synthase A 1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ghi03016]
    107951548
Enzymes [BR:ghi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     107951548
Transfer RNA biogenesis [BR:ghi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    107951548
 Prokaryotic type
    107951548
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 107951548
NCBI-ProteinID: XP_016742120
UniProt: A0A1U8NTE2
Position
A02:9553380..9556332
AA seq 335 aa
MGSGGGALGLSSPLFANGHLSSSSNSTSLPLPVEDGNHLAMVKPSSSVVNLPHYKWRLLI
AYDGTRYAGWQFQVSPPTIQCIVEKALIQITKLERECLHFVGASRTDTGVHAWGQVAHFI
TPFNYDSLETIHAALNGLLPSDIRVREISAATPEFHARFSAKSKVYHYKIYNDTIMDPFQ
RHYVYHSVYKLNTAAMREAAKMFIGKHDFSAFVNASRNDRVPDPVKTIFRFDVIEMGPLI
QLEVEGSGFLYRQVRNMVALLIQIGKEAIPTEIVPKILATLDRRELAKYALSAPPHGLCL
VSVKYNQEHLLLPSDCPTTSFGRHHTITKCKLPFY
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggggagtggtggaggagctttaggcctttcatctcctctctttgcaaatgggcatctt
tcttcttcctccaattctacttctctacctctacctgtggaagatggtaaccacttggca
atggtgaagcccagcagcagtgttgttaatcttccccactacaagtggcgtttgcttata
gcttatgacggcacccgctatgctggttggcaatttcaagtttcaccaccaactatacag
tgcattgtagaaaaggctttaattcaaataacaaagctcgagcgggagtgtctccacttt
gttggtgctagtaggacagatacgggagttcacgcctggggtcaggtggcacacttcatt
acacctttcaattatgacagcttggagaccattcatgctgctctaaacgggcttcttcct
tctgacatcagggttagagagatcagtgccgcaacacctgaatttcatgctcggttttca
gcgaaaagcaaggtttaccactacaagatttataatgacaccatcatggatccatttcag
cgtcattatgtttatcatagtgtttataaactcaatacagcagccatgagagaagcagca
aaaatgtttatcggaaagcatgacttctcagctttcgttaatgcttcacgtaatgatcga
gttccagatcctgtgaagacaatattccgctttgatgtcattgaaatggggcctcttata
cagctggaggttgaaggttccggttttttgtatcgacaagttcgaaacatggttgctttg
ttgattcaaattggaaaggaagcaattcctacagagattgttccaaagattttggcaact
ctagaccgcagagagctggccaaatacgccttgtctgccccaccgcatggcctttgcctt
gtgtctgtcaaatataatcaagagcacctactgcttccttcagattgcccgacaactagc
tttggtagacatcatactatcaccaaatgtaagcttcccttttattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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