KEGG   Gossypium hirsutum (upland cotton): 107951714
Entry
107951714         CDS       T04793                                 
Name
(RefSeq) ubiquitin isoform X2
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03010  Ribosome
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    107951714
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107951714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ghi03011]
    107951714
   04121 Ubiquitin system [BR:ghi04121]
    107951714
Ribosome [BR:ghi03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    107951714
  Archaea
    107951714
Ubiquitin system [BR:ghi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   107951714
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ribosomal_L40e Ubiquitin_2 Rad60-SLD_2 TBK1_ULD Dsc3_N Ubiquitin_5 DUF2604 OTU1_UBXL
Other DBs
NCBI-GeneID: 107951714
NCBI-ProteinID: XP_016742333
UniProt: A0A1U8NWI5
Position
D11:71898411..71905608
AA seq 104 aa
MQIFVKTLTGKTITLEVESSDTIDNVKANIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKWNEGES
NT seq 315 nt   +upstreamnt  +downstreamnt
atgcagatattcgtgaaaaccctaaccggcaagaccataactctcgaggtcgagagcagc
gacaccatcgataatgtcaaagccaatatccaagacaaagaaggaattcccccggaccaa
caacgtttaatttttgctggtaaacaacttgaagatggccgtacattggctgattacaac
attcaaaaagaatcaacgcttcatcttgttttaaggttgagaggtggaattattgagcct
tctttaatggctttggctcgtaaatacaaccaagacaaaatgatttgccgcaagtggaat
gaaggtgaaagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (10)   
   Pfam (10)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system