KEGG   Gossypium hirsutum (upland cotton): 107959129
Entry
107959129         CDS       T04793                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 10, mitochondrial-like isoform X1
  KO
K08956  AFG3 family protein [EC:3.4.24.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ghi01002]
    107959129
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ghi03110]
    107959129
Peptidases and inhibitors [BR:ghi01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   107959129
Chaperones and folding catalysts [BR:ghi03110]
 Other chaperones and cochaperones
  AAA proteases
   107959129
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_5 TIP49 AAA_22 RuvB_N AAA_16 AAA_2 AAA_33 AAA_17 Mg_chelatase AAA_14 AAA_PrkA IstB_IS21
Other DBs
NCBI-GeneID: 107959129
NCBI-ProteinID: XP_016750599
UniProt: A0A1U8PK59
Position
A05:8921772..8926852
AA seq 816 aa
MIFSKLGRSAPRSSHSRKLLYRGGGGAITGGTSPSLPLLSGSVDRIIGQSGYLRGYLALI
GAGKEFTSKAYLSDLNFVLANPRIRRFFSSEAPKKKNYENFYPKEKKEIPKQNDQKPDSK
EDSKTDDQWNFQETFLKLFQNLVTPLLVLALFLSMSPWTVEQQQISFQEFKNKFLEPGLV
DHIVVSNKSVAKVYVRNTPYNQTSDDLIQGPANGSSVRGHGGEYKCFFTIGSVESFEEKL
EEAQEALGIDPHDYVPVTYASDVMWYQELMRFAPTLLLLGTLMYMGRRMQGGLGVGGGGG
KGARGIFNIGKAHITKVDKNSKNKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKI
PKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCA
PSIIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDIL
DKALLRPGRFDRQISIDKPDIKGREQIFLVYLRKIKLDHEPSYYSQRLAALTPGFAGADI
ANVCNEAALIAARCEMAQITMEHFEAAIDRIIGGLEKKNRVISKLERKTVAYHESGHAVS
GWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLG
KISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMSKPYSNKTGAIIDGEV
REWVAKAYEKTVQLIEEHKEQVAQIAELLLEKEVLHQEDLVRVLGERPFKSSELTNYDRF
KQGFEEEETKSMQTPEGGIADDDGSAPPLVPQVVPT
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgatattttctaagcttggccgatcagctccccgatcttctcattcaagaaagttgttg
taccgtggcggaggaggtgccattaccggtggaacgtcgccgagcttgccgcttttgagc
gggagcgtagatcgaataattgggcaatcagggtatttgagaggatatctagctttaata
ggagctggaaaggagtttacttcaaaggcttatttgtcagatttgaatttcgttcttgct
aaccctagaattcgtcgctttttctcaagtgaagccccaaagaagaagaattatgaaaac
ttttaccctaaggaaaagaaggaaattccaaagcaaaatgaccaaaaacctgactccaaa
gaggattcgaagacagatgaccaatggaattttcaggaaactttcctgaagctttttcaa
aatttggttacccctttgcttgtacttgcattgtttctttctatgtctccctggactgtt
gagcagcaacaaattagtttccaagagttcaagaacaagtttctggaaccaggtttagtt
gaccatatagttgtttctaataagtcagttgcaaaagtgtatgtgaggaacacaccatac
aatcaaacaagtgatgatcttatccaaggtcctgctaatggttcttctgtcagaggacat
ggaggtgaatacaaatgcttcttcaccattggaagtgttgagtcttttgaggagaagttg
gaagaagcccaagaagctttagggattgacccacatgattatgttcccgtgacatatgcc
tctgatgtgatgtggtaccaggagttgatgaggtttgcaccaactttattgcttcttgga
accctcatgtatatgggccggagaatgcaaggtggattgggtgtcggtggaggtggtggt
aagggtgcccgtggaattttcaacataggaaaggcccatataaccaaggtggataaaaat
tccaagaataaggtctatttcaaagatgttgctggctgcgatgaggctaaacaagagatc
atggaatttgtgcacttccttaagaacccaaagaaatatgaggacctaggagctaaaatt
ccaaaaggtgctctgctggtgggtcctccaggtacgggaaagactctcctagcaaaagca
actgccggtgagtcaggtgtacctttcctatcaatatcaggttctgatttcatggagatg
tttgttggtgttggaccatccagggtgaggaatttgttccaagaagcaaggcagtgtgct
cctagtataatatttatcgatgagattgatgcaattggtcgagcaagaggtcgtggaggt
ttctcaggttctaatgatgagcgtgaaagtacgcttaatcaattgctagtagaaatggat
ggatttggaaccacttcaggagtagttgtccttgctggtaccaataggcctgatatctta
gacaaagctctattgaggccagggcgatttgatcgtcaaatttcaattgataaacctgac
attaaaggccgtgagcagatatttctggtctacttgagaaagataaagcttgatcacgag
ccatcatattactctcaaagacttgcagctctcacccctggctttgccggagccgacatt
gctaatgtttgtaatgaagctgctctaattgctgcaaggtgtgaaatggcacagatcaca
atggaacattttgaggccgctatagacaggatcattggtggtcttgagaagaagaacagg
gtaataagtaaacttgaaaggaaaacggttgcttatcatgaatcaggtcatgctgtttct
ggctggttcttggaacatgctgaacccctcttgaaagtcacaattgttcctcgtggtaca
gcagcacttggatttgctcagtatgttccgaatgaaaaccttctcatgacaaaagagcag
ctttttgatatgacgtgcatgacccttggtggtcgagcagctgaacaggttttgttggga
aagatatcaacaggtgcgcaaaatgacctggaaaaggtgactaagatgacgtatgcccag
gtggcagtttatggctttagtgacaaggtaggtctcctctcttttcctcagagagaagat
ggatttgagatgtcgaagccctatagcaataaaacgggtgccatcattgatggtgaagtg
cgtgagtgggtagcaaaggcgtatgaaaaaacagtacaacttatagaggaacataaagaa
caagtagcccagattgctgaattgttgcttgaaaaggaagttcttcaccaggaggatctg
gttcgagttttgggcgaacgaccatttaaatcaagcgaacttaccaactatgatagattt
aagcaaggttttgaagaggaagaaactaagagcatgcaaaccccggagggtgggattgcg
gacgatgatggttccgcacctccccttgttcctcaggttgtcccaacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (16)   
   Pfam (16)   
All databases (29)   

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