KEGG   Gossypium hirsutum (upland cotton): 107959926
Entry
107959926         CDS       T04793                                 
Name
(RefSeq) glutamine--tRNA ligase, cytoplasmic isoform X1
  KO
K01886  glutaminyl-tRNA synthetase [EC:6.1.1.18]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00970  Aminoacyl-tRNA biosynthesis
ghi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    107959926
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ghi01007]
    107959926
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ghi03016]
    107959926
Enzymes [BR:ghi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.18  glutamine---tRNA ligase
     107959926
Amino acid related enzymes [BR:ghi01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   107959926
Transfer RNA biogenesis [BR:ghi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    107959926
 Prokaryotic type
   Other AARSs
    107959926
SSDB
Motif
Pfam: tRNA-synt_1c tRNA_synt_1c_R1 tRNA-synt_1c_C2 tRNA-synt_1c_C tRNA_synt_1c_R2
Other DBs
NCBI-GeneID: 107959926
NCBI-ProteinID: XP_016751588
UniProt: A0A1U8PMM3
Position
A05:70786314..70793027
AA seq 793 aa
MVVKGEESDRILELFLKIGLDERTARNTIANNKVTANLTAVVHEAALANGCDRAIGNLLY
TVATKYPANALVHRPKLLEYVVSSKIKTPAQLEAAFSFLSNVASEEFKRNEFEEACGVGV
EVSLEELTQTVNEIFEEYKAVILERRYRTNVGELFGSIRKKHPWADPKMAKQLVDAKMYE
LLGERTAADDEKPSKKKEKKEKPAKVEKAVVDETPAQPSEEELNPFSIFPAPEDNIKVHT
EVSFSNGSVLRCYNTRERLDNHLKVTVGRVFTRFPPEPNGYLHIGHAKAMFVDFGLAKER
GGCCYLRYDDTNPEAEKKEYINHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGH
AYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFDDMKRGLIEEGKATLRMKQDMQSDN
FNMYDLIAYRIKFTPHPHAGDQWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYW
LLHVLDLYQPYVWEYSRLNVTNTVMSKRKLNYIVTNKYVDGWDDPRLMTLAGLRRRGVTS
TAINSFVRGIGITRSDCSMIRLDRLEYHIREELNKTAPRVLVVLHPLKVVITNLESGSVL
DLDAKKWPDARTDDTSAFYKVPFSNVVYIERSDFRMKDSKDYYGLAPGKSALLRYAFPIK
CTDVILADDKETVLEIRAEYDPSKKSKPKGVLHWVAEPSPGSDPLKIEVRLFDKLFNSEN
PAELDNWLTDLSPNSKVVVPNAYAVPSLGKAAVGDTFQFERLGYFTVDKDSTAEKLVFNR
TVTLKDTYSKGGK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atggtggtcaaaggcgaagaatctgacagaatcttagagctcttcttaaagattggttta
gacgaacgaactgctcgcaacaccatcgctaacaacaaggtcactgctaatctcactgcc
gtcgttcacgaggctgctttggctaacggatgtgaccgtgcaattggaaatcttttatat
acggttgccacgaagtaccctgcgaatgcactcgtacatcgtccaaagttacttgaatat
gttgtctcttccaagattaagactccggcacagttagaagctgcattttcatttctctcg
aatgttgcatcggaggagtttaagaggaatgaatttgaagaagcatgcggagtaggagtc
gaagtttctctggaggaacttacacagactgtcaatgaaatttttgaagagtataaggct
gtaattttggaacgacgttaccgaacaaatgttggtgaattgtttgggagcattaggaag
aagcatccttgggcggatccaaagatggctaagcaacttgtagatgcaaaaatgtatgag
ttacttggtgagaggacagcagcagatgatgagaagccttctaaaaagaaggaaaagaaa
gagaaacctgctaaagttgaaaaagctgttgttgatgagactcctgcacagccatctgaa
gaagaacttaatccattttcaatatttcctgctccagaagacaatataaaggtgcacaca
gaagtatcttttagcaatggttctgtgctaagatgttacaatacgagggaaaggcttgac
aatcacttgaaggtcaccgtgggaagagtttttactcgtttccctcccgaaccaaatggg
tatctacacattggacatgcaaaagcgatgtttgttgactttggccttgcgaaagagagg
ggtggatgttgctacctcagatatgatgatacaaatcctgaagctgaaaagaaagaatac
attaatcacattgaagaaattgtccagtggatgggctgggaaccattcaagataacttac
actagtgactatttccaagaattgtatgaattagcagtggagctgatacgaaggggtcat
gcatatgttgatcaccagacccctgaagagataaaggagtatagggaaaagaagatgaac
agcccttggagagatagaccaattgctgagtcattaaaactctttgatgacatgaagaga
ggtctgatagaagagggcaaagcaacacttaggatgaagcaagatatgcagagtgataac
ttcaatatgtatgacctcattgcttatcgtatcaagtttactcctcaccctcatgctggg
gatcagtggtgcatttatccgagctatgattatgctcattgcattgtggactctcttgaa
aatatcacacattcactgtgtacacttgaatttgagacgaggcgtgcttcttactattgg
ctgctacatgtattggacctttaccagccatatgtgtgggaatactcacgactgaatgtt
acaaacactgtgatgtctaaacggaagttaaactacatcgtgacaaacaaatatgttgat
ggttgggatgatccccgtctcatgacattagctggtttacgacgtaggggtgtgacttca
actgcaataaattcttttgttcgaggaattggaatcactagaagtgattgtagcatgatt
cgtttggatcgccttgagtatcacataagagaagaattaaacaagacagcacctcgtgta
ttggttgtgctgcatcctcttaaggttgtcataaccaacctcgaatctggttctgttttg
gatcttgatgcaaagaaatggcctgatgctcgaacagatgacacatctgccttttacaag
gtgcccttttcaaatgttgtatatattgagcgctcagatttccggatgaaagattctaaa
gattactatggattggctcctggcaagtcagcactgctaagatatgcattcccaataaag
tgtacagatgtaatattggcagatgataaagaaactgtgcttgagattcgagctgaatac
gatccttccaaaaaaagcaagccgaagggggttctccactgggttgctgaaccgtccccg
ggttctgatccattgaagattgaagtccgattgtttgacaaactctttaattctgagaat
cctgctgaacttgataattggctcactgatctcagcccgaattccaaagtggtggtacct
aatgcatatgcagtgccatcacttggtaaggctgctgtaggggatacatttcagttcgaa
aggctaggctatttcacagttgataaggactcgactgccgagaagcttgtctttaatcgt
acggttacccttaaggatacttacagtaagggtgggaaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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