KEGG   Gossypium hirsutum (upland cotton): 107961522
Entry
107961522         CDS       T04793                                 
Name
(RefSeq) syntaxin-124-like
  KO
K08486  syntaxin 1B/2/3
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    107961522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107961522
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107961522
Membrane trafficking [BR:ghi04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    107961522
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   107961522
  Exosomal proteins of other body fluids (saliva and urine)
   107961522
SSDB
Motif
Pfam: Syntaxin SNARE ATG17_like Syntaxin-6_N DUF1664 MCPsignal DUF5790 DUF5370 Stonustoxin_helical Cytochrom_C_2 HTH_25 PTS_IIA Syntaxin_2 Helo_like_N Mit_KHE1 TMPIT
Other DBs
NCBI-GeneID: 107961522
NCBI-ProteinID: XP_016753123
UniProt: A0A1U8PS03
Position
A06:complement(127669519..127670918)
AA seq 307 aa
MNDLISSSFRKYTDLKQQAYMDDIEAGNETVNLDKFFEDVENVKEDMKGIEKLYKALQEA
NEECKTAHNAKTMKQLRSRMDSDVEQVLKRVKVIKGKLEALEKSNAASRNVPGCGPGSSS
DRTRTSVVSGLGKKLKVMMDEFQSLRARMQSEYKETVERRYFTITGEKPDEDTIENLISS
GESESFLQRAIQEQGRGRIMDTISEIQERHDAVKEIEKNLIELHQIFLDMAALVEAQGQQ
LNDIESNVAHASSFVRRGTEQLEEAREHQKASRKWTCIAIIAAIILILVILLPLLPTIIT
LIKTKKI
NT seq 924 nt   +upstreamnt  +downstreamnt
atgaacgatttaatctcaagttcgttcaggaaatatactgacctgaaacaacaagcgtat
atggacgatattgaagccggcaatgaaacggttaatctcgataagttcttcgaagatgtt
gaaaatgttaaagaagacatgaaaggcattgagaagctttataaagcactgcaagaagcc
aatgaagaatgtaaaacggcgcataatgctaaaacaatgaagcaattacgttctcgtatg
gattctgatgtggaacaggttcttaaacgagtgaaagtcattaaagggaagcttgaagcc
ttggaaaaatcgaacgccgcgagccggaatgttccgggttgtggacccggttcatcttca
gatcggactcgaacatccgtcgttagcgggttaggcaagaaattgaaagtaatgatggac
gagtttcaaagcttacgagcaaggatgcaatcggaatataaagaaaccgttgaacgtcga
tatttcacgatcaccggcgaaaaacctgatgaagacacgatcgagaacttgatttcaagc
ggcgaaagtgaaagtttccttcaacgtgcgattcaagaacaaggaagaggtcgaatcatg
gacacgatatccgagatccaagaacgacacgacgccgttaaggaaatcgagaagaacttg
attgagctccaccagatcttcctcgacatggcggcactcgtcgaggctcaaggtcaacaa
ttgaacgatattgaaagcaacgtcgcgcatgcgagctcgttcgtccggcgaggtacggaa
caactcgaagaagcgcgcgaacatcaaaaagcgtcgaggaaatggacgtgtatagcgatt
attgctgcgattattctcattttagtcatccttttgccattgttgccaactatcataact
ctcataaagacgaaaaagatatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (28)   

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