KEGG   Gossypium hirsutum (upland cotton): 107961902
Entry
107961902         CDS       T04793                                 
Name
(RefSeq) 26S proteasome regulatory subunit 6A homolog
  KO
K03065  26S proteasome regulatory subunit T5
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03050  Proteasome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    107961902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ghi03051]
    107961902
Proteasome [BR:ghi03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     107961902
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C nSTAND3 AAA_5 AAA_16 RuvB_N AAA_2 AAA_22 DUF815 AAA_14 AAA_7 Mg_chelatase IstB_IS21 PhoH AAA_24 AAA_19 TIP49 AAA_33 Parvo_NS1 AAA_18 RNA_helicase AAA_25 AAA_28 Sigma54_activat AAA_11 TsaE ATPase LMBR1
Other DBs
NCBI-GeneID: 107961902
NCBI-ProteinID: XP_016753567
UniProt: A0A1U8LXQ3
Position
A11:120313589..120317163
AA seq 423 aa
MATAMVEDSSFEEDQLASMTTEDIVRASRLLDNEIRILKEEMQRTNLELDSYKEKVKENQ
EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN
YYA
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggcgaccgccatggtcgaagattcgagcttcgaagaggaccagttggcttcgatgacc
accgaggacatcgtccgagcttctcgtcttctagataacgagattcgaattctcaaggag
gagatgcaaaggacaaatctcgagttagattcgtacaaagagaaggttaaagagaatcaa
gaaaagatcaagcttaacaagcaattgccttacttggttggcaacatcgtcgagatatta
gagatgaatcccgaagacgaggcagaggaagatggtgccaacattgatcttgattcacag
aggaagggtaaatgtgttgtactgaaaacctcaactcgtcagaccatctttctacctgtg
gtcggacttgttgaccctgataaattgaagcctggtgatttggttggcgtcaataaagac
agctacttgatattggatactctgccatctgaatacgactctcgagtaaaggctatggag
gttgatgagaaaccaaccgaggattacaatgacattggtgggttggaaaagcagatccaa
gaactagttgaggctattgtgttgcctatgactcataaagaacggtttcaaaagctagga
gttcgaccacccaagggtgtgctcttatacggacctcctggtactggaaaaaccctgatg
gcccgtgcttgtgcggcacaaacaaatgcaacatttctgaagctagcaggtccgcaactg
gttcagatgttcatcggagatggagcgaaacttgtccgtgatgcctttcagcttgcaaaa
gaaaaatctccatgcatcatttttattgatgaaatcgatgcaatcggtacgaagcgtttt
gatagtgaagtgagtggagatagggaggttcaacgaacaatgttggaactgctcaaccag
cttgatggctttagcagtgacgagcgtattaaggtaatagcagctactaaccgagctgat
atccttgaccctgctctcatgcgttccggtcgattggatcgtaaaattgaattcccacat
cccactgaagaagcaagagcccgaatccttcagatccactcaaggaagatgaacgttcat
ccggatgtcaatttcgaagaacttgctcgttcgaccgatgattttaatggagcacagctg
aaagctgtttgcgtagaggcaggcatgctagcacttcgccgagatgcaactgaggtgaat
catgaggatttcaatgaaggtataattcaggttcaagctaagaagaaggcaagcttaaat
tactacgcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (29)   
   Pfam (29)   
All databases (42)   

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