KEGG   Gossypium hirsutum (upland cotton): 107962752
Entry
107962752         CDS       T04793                                 
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic isoform X1
  KO
K02357  elongation factor Ts
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:ghi03012]
    107962752
   03029 Mitochondrial biogenesis [BR:ghi03029]
    107962752
Translation factors [BR:ghi03012]
 Eukaryotic type
  Elongation factors
   107962752
 Prokaryotic type
   107962752
Mitochondrial biogenesis [BR:ghi03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    107962752
SSDB
Motif
Pfam: EF_TS S1 RNase_II_C_S1 Spt6_S1 DUF6742 CsrA
Other DBs
NCBI-GeneID: 107962752
NCBI-ProteinID: XP_016754734
UniProt: A0A1U8PWT3
Position
A06:complement(15784294..15790134)
AA seq 1083 aa
MTPVIPYSVSNITFIPGAACTVRKNTSLTRCSSSRKHTRYALPSQRFILPLSTSVTSFRK
YGTGYALHGKLGICLSTAGTDVAVEESDSSVTKVSSGGSEIPSDAVETSEDSTSQPDSTP
PTQSKRARPVRKSEMPPVKNEELIPGAMFTGKVRSIQPFGAFVDFGAFTDGLVHVSRLSN
SFVKDVASVVSVGQEVQVRLVEVNTENGRISLSMRENDDASKRQPRKDGPASTDKARPSR
KNASKSSSKKDFKSSKFVKGQELDGTVKNLTRSGAFISLPEGEEGFLPQSEEADDGLMSM
MGNSSLQIGQEVKVRVLRITRGQVTLTMKKEEDDDKLDSQLSQGVVYTATNPFMLAFRKN
KEIAAFLDQREKAEKVEVQPAANVETTTVSTEVDETVVQETDTIAEIVNKDEETAEKEID
DSFEALSPERSGQVPLADVVESDQIAGSSGEVVDQVTSENSVDEESTQKDVVQEEAPLAE
DETSVAASVQEEQIGSIPEEQVETPLAEAKTPSASSVQEEEIGAVPDENGNVASSVVQPD
VTDPKDAEDTVENEAGPDPPQESADDQIKSSGSEAVEEVENQPEDTKDEVQIETPVSKDE
IPSTSEVEEADSAPQKNDEVTDSNGSMSKENVTTAATISPALVKQLREETGAGMMDCKKA
LAETGGDIVKAQEFLRKKGLASAEKKSSRVTAEGRIGSYIHDSRIGVLVEVNCETDFVSR
GDIFKELVDDLAMQVAACPQVQYLVPEDVPEEIVNKEREIEMQKEDLLSKPEQIRSKIVE
GRIQKRIDELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRFNLGEGLEKKSQD
FAAEVAAQTAAKPISSAGKEQSTSVEVKETDEKPKAAVSAALVKQLREETGAGMMDCKKA
LSETGGDLEKAQEYLRKKGLSTADKKSSRLAAEGSIGSYIHDSRIGVLIEVNCETDFVGR
SEKFKELVDVLAMQVVASPQVQFVSIEDIPESIVSKEKELEMQRDDLASKPENIREKIVE
GRVSKRLGELALLEQPFIKDDSLLVKDLVKQTVAALGENIKVRRFVRFTLGETTEDTKTG
TEA
NT seq 3252 nt   +upstreamnt  +downstreamnt
atgactcctgtgatcccatattctgttagcaacattacattcatccctggagctgcctgt
acagtaaggaagaacactagtttgacaagatgcagttcatcaaggaaacacacgagatat
gctttaccctctcagagattcatcctacctctatcaacctctgttacttcatttcgaaaa
tacggaacagggtatgccttacatggaaaactgggaatttgtttatcaaccgcagggact
gatgtggcggtggaggaatctgattcttctgtgacaaaagtttccagtggaggatccgaa
ataccttcagatgccgttgaaacaagtgaagattcgactagccaaccagattctactcct
ccaactcaatcaaaacgagcaagacctgttaggaaaagtgagatgccacctgtaaagaat
gaggagcttattcctggtgcaatgtttactgggaaagtacgatcaatccaaccatttggt
gcttttgttgattttggagctttcacagatggactggtgcatgtttccaggttgagcaac
agctttgttaaggatgttgcaagtgttgtttctgttggacaagaggtgcaggtgaggtta
gttgaagtaaacactgagaatgggaggatatctctttccatgcgtgaaaatgatgatgct
agtaagcgccagccacggaaagatggtcctgccagtactgataaggcaaggccttccagg
aagaatgcttcaaagtccagctcaaaaaaagatttcaaaagctcaaaattcgtcaaggga
caagaactagatggcacggtaaagaatttaactaggtctggtgctttcatatctctcccc
gagggggaagaaggattcttgccccaatcagaagaagctgatgacggacttatgagcatg
atggggaactcatcactgcaaattggccaagaagtcaaagttcgtgtgctgcgcatcaca
aggggacaggtaaccttgacaatgaagaaagaagaggatgatgacaaattggactcacag
cttagccaaggtgtggtgtacactgcaacaaatccctttatgctggctttccgtaagaat
aaggagattgctgcatttttggatcagagagaaaaggcagagaaagtagaggttcaaccg
gcagctaatgtggagacaaccactgtctctactgaagtggatgaaacagtggtacaggaa
acagatacaatagctgagattgtgaacaaggatgaggaaactgcagagaaggaaatagat
gacagttttgaagcgttgtctcctgaacgtagtggacaagttcctttggcggatgtggtg
gaaagtgatcaaatagctggatcatctggagaagtagttgaccaagtgacttccgaaaat
tcagttgatgaagagtctacacaaaaagatgtagtacaagaggaagctcccctagctgag
gatgaaacatcggttgctgcatcagttcaggaggaacaaatcggaagtattcccgaagag
caggtagaaacacctctagctgaggctaaaactccctctgcttcatctgttcaagaagaa
gaaattggagctgttccggatgaaaatggcaatgttgccagttcagttgtacaaccagat
gttactgatcccaaagatgccgaagatacagtggaaaacgaggcaggtcctgatccacct
caagaatcagctgatgatcagattaagtcttcaggaagtgaagcagttgaagaagtagaa
aatcaacccgaggataccaaggatgaagtgcaaatagagacaccagtttctaaggatgaa
attccttctacttctgaagttgaagaagcagactctgcacctcaaaagaacgacgaggtt
actgattcaaatggctctatgtccaaggaaaatgtgactacagcagcaactatatcaccg
gctctagtaaagcagctccgtgaagaaactggagcaggaatgatggattgcaagaaagca
ctcgcagagactggtggggatattgttaaagctcaggagtttctccgcaagaaaggcttg
gcaagtgcggaaaaaaaatccagtcgagtcactgctgaaggaagaataggttcttacatt
cacgatagcaggattggtgtcctagtagaggttaactgcgagacagattttgtctcacgg
ggtgacatttttaaggagcttgttgatgatctagccatgcaagttgctgcttgccctcaa
gtacaatatcttgttccagaagatgttcctgaggagattgtaaacaaagaaagagaaata
gagatgcaaaaggaagatctcttatctaaaccagaacagattagatcaaagattgttgaa
ggacggatacagaagagaattgacgagttggctttacttgagcaaccctacattaagaat
gacaagatggtggtgaaagattgggtaaagcagactattgcaaccattggagagaacata
aaagtgaaaagatttgtgaggttcaatcttggagaggggctggagaagaaaagtcaggat
tttgctgctgaagtggctgcccaaactgctgcaaaacccatttcttccgctggaaaagag
caatcgacttcagtggaagtcaaggaaactgatgagaaaccaaaagcagctgtctccgcc
gcacttgttaaacaactacgtgaagaaacaggagccgggatgatggactgcaagaaagct
ctgtctgaaaccggaggtgatcttgagaaggctcaggaataccttagaaagaagggccta
tcaactgctgacaagaaatccagccggctcgctgctgaaggcagtattggttcctacatt
catgactcgaggattggtgtactaattgaagtcaactgtgagaccgactttgttggtaga
agtgaaaagttcaaggagttggttgatgtcctagcaatgcaagttgtggccagtccacaa
gtgcagtttgtatccattgaagacattccggagagtatcgtgagtaaagaaaaagagctg
gagatgcaaagagatgatctcgcatctaaaccagagaacattagagagaagatagtggaa
ggcagagtttcaaagaggcttggagagcttgcccttttggaacagcccttcattaaggat
gacagtctgttggttaaagacttggtaaagcaaactgttgcagcacttggagagaacata
aaagtccgaaggtttgttcgatttacacttggagagacaactgaagataccaaaacagga
actgaagcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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