KEGG   Grimontia hollisae: AL542_09015
Entry
AL542_09015       CDS       T04260                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
gho  Grimontia hollisae
Pathway
gho03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gho00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AL542_09015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gho03021]
    AL542_09015
   03400 DNA repair and recombination proteins [BR:gho03400]
    AL542_09015
Enzymes [BR:gho01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AL542_09015
Transcription machinery [BR:gho03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AL542_09015
DNA repair and recombination proteins [BR:gho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AL542_09015
SSDB
Motif
Pfam: RNA_pol_Rpb6 AmiR_N DUF1599
Other DBs
NCBI-ProteinID: AMG30507
UniProt: A0A377HI52
Position
1:1147021..1147296
AA seq 91 aa
MARVTVQDAVEKIGNRFDLVLVAARRARQMQTGGKDALVQEENDKQTVIALREIEEGLIT
KEILDARERQEQQEQEAAEMAAVSTITGTLR
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcacgcgtaaccgttcaagacgctgttgaaaaaattggcaaccgtttcgacctagta
ttggtagcagctcgccgcgcacgccaaatgcaaactggtggtaaagacgcactggttcag
gaagagaatgacaagcaaactgttatcgctctgcgtgaaattgaggaaggcctgatcacc
aaagagatcctggatgcccgtgagcgtcaagagcaacaagaacaggaagcagcagaaatg
gctgctgtcagcaccatcacaggaactcttcgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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