KEGG   Gordonia iterans: C6V83_08855
Entry
C6V83_08855       CDS       T05370                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
git  Gordonia iterans
Pathway
git03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:git00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C6V83_08855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:git03400]
    C6V83_08855
Enzymes [BR:git01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     C6V83_08855
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     C6V83_08855
DNA repair and recombination proteins [BR:git03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     C6V83_08855
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Auto_anti-p27 TackOD1
Other DBs
NCBI-ProteinID: AVM00364
UniProt: A0A2S0KFC0
Position
1939383..1940270
AA seq 295 aa
MPELPEVETIRMGLAAHLTGRRIDDVEPLHPRATRRHVYGPDDLRNRLRGKEIQSVDRRG
KYLWLSAADAADEVGVVVHLGMSGQMLMAERGAPDPVHLRIRTLLDDGNELRFVDQRTFG
GWHLDEFVEAGPRRLPESVAHIAPDPFEEAYDADAVVNLLRRKDTEIKRALLDQTVVAGV
GNIYADEALWRAGVHGRRRTRGLSRAKLHEVLFFVREVMAEAIKVGGTSFDDLYVNVNGE
SGYFERALNAYGREGEECARCGTPMARESFMNRSSFSCPQCQRPPRRRAVRARHL
NT seq 888 nt   +upstreamnt  +downstreamnt
gtgcccgaactccccgaggtcgagaccattcggatgggcttggccgcgcacctgaccgga
cgccggatcgacgacgtcgagccgctccacccgcgcgccacgcgacgccatgtgtacggc
ccggacgacctgcgtaacaggttgcgcggcaaagagatccagagtgtcgaccggcgcggg
aagtacctgtggctgagcgctgcggacgccgccgacgaggtcggggtcgtggtgcacctg
gggatgagcggccagatgctgatggccgagcgcggtgcacccgatccggtgcacctgagg
atccggacgctgctcgacgacggcaacgaactgcgcttcgtcgatcagcgcaccttcggc
ggctggcaccttgacgagttcgtggaggccggtccgcggcggcttcccgagtccgtcgcg
cacatcgcgccggacccgttcgaggaggcgtacgacgccgacgctgtggtgaacctgttg
cgccgcaaggacaccgagatcaaacgtgcgctgctggatcagaccgtggtggccggggtc
ggaaacatctacgccgacgaagcgctctggcgcgcgggagtgcacggtcgtcgtcgtacc
cggggcctgagccgagcgaagctgcacgaggtcctgttcttcgtccgcgaggtgatggcg
gaggcgatcaaggtcggtggaacgtcgttcgacgatctgtacgtcaacgtcaacggcgag
tccgggtacttcgagcgtgcgctgaacgcctacggacgggaaggggaggagtgcgcgcgg
tgcggcaccccgatggcccgcgaaagcttcatgaaccgcagctcgttctcttgtccgcag
tgtcagcgcccgccccgcagacgcgccgtacgggcccggcacttgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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