KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107107071
Entry
107107071         CDS       T04299                                 
Symbol
RAD23B
Name
(RefSeq) RAD23 homolog B, nucleotide excision repair protein
  KO
K10839  UV excision repair protein RAD23
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03420  Nucleotide excision repair
gja04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107107071 (RAD23B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107107071 (RAD23B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:gja03051]
    107107071 (RAD23B)
   03400 DNA repair and recombination proteins [BR:gja03400]
    107107071 (RAD23B)
Proteasome [BR:gja03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    107107071 (RAD23B)
DNA repair and recombination proteins [BR:gja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      107107071 (RAD23B)
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD Rad60-SLD_2 Crinkler UBA_3 Dsc3_N UBA_2 DUF1421 Ubiquitin_2
Other DBs
NCBI-GeneID: 107107071
NCBI-ProteinID: XP_015262783
Position
Un
AA seq 427 aa
MQITLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVTKPKAAAAAAVPAPSPATTQQSSAAITTVSSSTIAAAAPTPAPVPA
PASGPVSVPAPAAPTPAAVACEPAPVSAPVEEKPAEKSLESPADTSPLPTDRYEQIVETR
VSLLMFYLALEDSLELTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGI
PGDRESQGMADPPQAATTGASPSSAVAAAAAAAVTTTTTTTTTSSTGGHPLEFLRNQPQF
QQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQESGQGGGGSGGG
GGGGGVAAEAGSRHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL
QQNFDED
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgcagatcacgttgaagacgctgcagcagcagaccttcaagatagacatcgatcccgag
gagacggtaaaagcattgaaagagaagattgaatcagaaaaggggaaagatgcttttcct
gtagcgggccaaaaattaatatatgcaggtaaaatacttaacgatgatactgctcttaaa
gagtacaaaatcgatgagaaaaactttgttgtggttatggtgacaaaacccaaagcagca
gcagcagcagctgttccagctccatcaccagctacaactcagcagtcaagtgctgccatc
actactgttagctcttctacgatagctgctgcagccccaacaccagcacctgtcccagcc
ccagcttctggaccagtttcagttcctgcaccagctgctccaacaccagctgcagtagct
tgtgagcctgcaccagtaagtgcccccgtagaagagaaaccagcagagaaatcattagag
tcaccagctgacaccagtccattacctacagacaggtatgagcagattgtggaaaccaga
gtgtctcttcttatgttttatttggcattggaagatagccttgaattgacaggtcagtcc
tatgaaaatatggtgacggagatcatgtcaatgggatatgagcgagagcaagtgattgct
gcattgagagccagcttcaacaatcctgacagggcagtggagtaccttctaatgggaatc
cctggggacagagagagtcaaggtatggctgatccccctcaagcagccaccactggtgct
tctccatcctcagcagtggcagcagcagcagcggcggcggtaactactactactacaact
actactactagttctacaggaggacatccacttgaatttttacgaaatcaacctcagttc
cagcagatgaggcaaattattcagcagaatccatctcttttacctgcgttgctacagcaa
ataggacgggaaaatcctcagctattgcagcaaataagccaacatcaagagcattttatt
cagatgttaaatgagcctgttcaagagtcaggtcaagggggcggtggcagtggcggcggc
ggtggtggtggtggagtggcagcggaagctggaagccgtcacatgaactatattcaagta
acacctcaggaaaaagaagctatagaaaggttaaaggcactagggttccctgaaggactt
gtgatacaggcatattttgcatgcgagaagaatgaaaatttggcagccaacttccttcta
caacagaactttgatgaagattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (55)   

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