KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107107089
Entry
107107089         CDS       T04299                                 
Symbol
SOX13
Name
(RefSeq) SRY-box 13
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:gja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gja03000]
    107107089 (SOX13)
Transcription factors [BR:gja03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    107107089 (SOX13)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 107107089
NCBI-ProteinID: XP_015262805
Position
Un
AA seq 615 aa
MSMRSPPSPQLELNGAGNMVNCTIKTEEKNESCFQSTQEEAISTTPGSDKSHKSPLPLSE
GTNSQSLPQESGSPVDRALDSRNPGFEPVVSNQEKLDFNKNLKEVMPTIEKLLSSDWKER
LLGKSPTESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQ
QMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPNHQPIPVTPDTQ
MALPIQPIPCKPVEYPMQLLHSPPPSALKRPASSGHLQIQESSQPLNLTAKPKGSELPNA
SCSPNLKISSCQSLTPSHRVSRELQTSPPSLPLGFLGEGDAITKAIQDARQLLHNQSRAI
DGSPNHPYRKDHVSLDSSPAKEQMEETSLQRLDESMLTCDGDGSRHFPESRNNNHIKRPM
NAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEKY
PNYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIAPQGNQVPPSSSDLVYQR
SVGMPLASPLMDHYLPRGMEPNMPVIVNTRSLKPEEGDGAEDSHSVPDGEMYHYSEDEDS
EGEDKSDGELVVLTD
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgtccatgaggagccctccatctcctcagctggagctcaatggagctgggaacatggtg
aattgcaccattaaaacagaagagaaaaacgagagctgtttccagtccacacaggaagag
gccattagcaccacacctggttctgacaagtcacacaaatcaccactgccattgagtgaa
ggcaccaattctcagtccctcccacaggaatctggatctccagtggacagggcattagac
tccaggaaccctggatttgagccagtagtcagcaatcaggaaaaattggattttaataag
aacctcaaagaagtaatgcccaccattgagaagttactgtccagtgactggaaagaaaga
cttctggggaaaagtccaacagagtctaaagaggtgaaaggaacccaagaaagcctggca
gagaaggaactgcagctgttggtcatgattaaccagctgtccacccttcgggaccagctg
ttgacggcccattctgaacagaagaacatggcagctatgctgtttgagaagcagcagcaa
cagatggagttggccaggcagcagcaggaacagattgccaagcaacagcaacagctcatc
cagcagcaacacaaaatcaacctactgcagcagcagattcagcaggtcaacatgccctat
gtaatgattccagcctttcctcccaaccaccagcctattcctgtcacccctgacactcaa
atggcacttcctatacagccaatcccttgcaagccagtagagtaccccatgcagcttctt
cacagccctcctccttcagccctgaagagacctgccagctcaggccacctgcagatccag
gaatcttcacagccattgaacttaacagctaagcccaaaggctctgagctccccaatgcc
tcctgttcacctaatttaaagatcagcagctgtcagtccctcactcccagccatagagtt
tctcgggagttgcagaccagtcctcccagcctgcctttggggttcctcggagaaggagat
gctataaccaaagcaatccaagatgctcggcagcttctgcacaaccaaagcagagcaata
gatggctctccaaatcacccctataggaaggaccatgtcagcttggattcttctccagca
aaagaacagatggaagaaacttctttgcagaggctggatgagtccatgttaacctgtgat
ggggatggctcacgacatttccctgaatccaggaacaataaccacatcaagcgtcccatg
aatgctttcatggtgtgggccaaggatgagagacgcaagatcttgcaggccttcccagat
atgcacaactcaagcatcagcaaaattctaggctctcgatggaaatcgatgtcaaaccag
gagaagcagccctactatgaggagcaggcacgactcagccggcagcacctggaaaagtac
cccaattacaagtacaagcctcgccccaagcgcacctgcattgtggaagggaagcggctg
cgtgttggcgagtacaaggcactgatgaggaaccggcgccaggacgccaggcagggctac
ctgattgcgccccaaggcaaccaagtgccgccttcgtcctcggatctcgtgtaccagcgt
tcagttgggatgccgctggcctcacccctgatggatcactacttgccccgtggcatggag
ccaaacatgcccgtcatagtgaacacgcgcagcctgaagccagaagaaggggacggggca
gaagacagccattcggtgcctgatggggagatgtaccactacagtgaagacgaggattcc
gagggcgaggacaagagtgatggcgagctggtggttctcacagactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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